gene,0,0 GSM1833288,0,0.845 GSM1833289,0,0 GSM1833290,0,32.288 GSM1833291,0,23.956 GSM1833292,0,0.27 GSM1833294,0,3.57 GSM1833295,0,1.691 GSM1833296,0,2.024 GSM1833297,0,2.884 GSM1833298,0,5.557 GSM1833300,0,4.559 GSM1833302,0,6.655 GSM1833304,0,6.406 GSM1833316,0,121.54 GSM1833318,0,379.723 GSM1833321,0,145.731 GSM1833329,0,81.064 GSM1833330,0,162.057 GSM1833331,0,121.158 GSM1833326,0,131.538 GSM1833327,0,125.071 GSM1833328,0,135.78 GSM1833323,0,170.136 GSM1833324,0,228.295 GSM1833325,0,148.818 GSM1833279,0,20.84 GSM1833280,0,25.775 GSM1833281,0,56.895 GSM1833282,0,56.972 GSM1833307,0,98.827 GSM1833309,0,92.85 GSM1833312,0,64.559 GSM1833314,0,38.164 GSM1985628,0,146.639 GSM1985629,0,169.325 GSM1985630,0,129.106 GSM1985631,0,237.565 GSM2151860,0,285.066 GSM2151861,0,271.503 GSM2151862,0,255.511 GSM1833332,0,137.2 GSM1833333,0,131.479 GSM1833334,0,218.983 GSM1833283,0,14.136 GSM1833284,0,20.633 GSM1833285,0,27.495 GSM1833286,0,12.803 GSM1833287,0,21.405
Synonyms | GRP;YER112W |
Description | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated |
---|---|
Chromosome | 19p13.11 |
Database Reference | MIM:607284 HGNC:17259 HPRD:06284 Vega:OTTHUMG00000183357 |
See related | THE HUMAN PROTEIN ATLAS |
Dataset | GSE71318 |
LSM4 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
---|---|---|---|
human 2 cell | 0 | 12.4 | 32.288 |
human 4 cell | 0.27 | 1.858 | 3.57 |
human 8 cell | 2.884 | 5.557 | 6.655 |
human early blastocsyt | 121.54 | 145.731 | 379.723 |
human ICM | 81.064 | 121.158 | 162.057 |
human late blastoycst | 125.071 | 131.538 | 135.78 |
human middle blastocyst | 148.818 | 170.136 | 228.295 |
human MII oocyte | 20.84 | 41.335 | 56.972 |
human morula | 38.164 | 78.704 | 98.827 |
human stem cells | 129.106 | 237.565 | 285.066 |
human TE | 131.479 | 137.2 | 218.983 |
human zygote | 12.803 | 20.633 | 27.495 |
Comparing LSM4 expression between groups | FDR |
---|---|
human 2 cell VS human 4 cell | NS |
human 2 cell VS human 8 cell | NS |
human 2 cell VS human ICM | NS |
human 2 cell VS human MII oocyte | NS |
human 2 cell VS human TE | 0.0471550323133906 |
human 2 cell VS human early blastocsyt | 0.0485254296245935 |
human 2 cell VS human late blastoycst | NS |
human 2 cell VS human middle blastocyst | 0.0425611260530925 |
human 2 cell VS human morula | NS |
human 2 cell VS human stem cells | 0.00159925530608966 |
human 2 cell VS human zygote | NS |
human 4 cell VS human 8 cell | NS |
human 4 cell VS human ICM | 0.0116424372760053 |
human 4 cell VS human MII oocyte | 0.0174003875340732 |
human 4 cell VS human TE | 0.0185254598632816 |
human 4 cell VS human early blastocsyt | 0.0263647064356765 |
human 4 cell VS human late blastoycst | 0.00980317747454958 |
human 4 cell VS human middle blastocyst | 0.0166376293616638 |
human 4 cell VS human morula | 0.00814201610233274 |
human 4 cell VS human stem cells | 0.000114083154789657 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others human 2 cell[4]
human 4 cell[4]
human 8 cell[5]
human early blastocsyt[3]
human ICM[3]
human late blastoycst[3]
human middle blastocyst[3]
human MII oocyte[4]
human morula[4]
human stem cells[7]
human TE[3]
human zygote[5]