gene,0,0 GSM967508,0,0.009 GSM967509,0,0 GSM967510,0,0.008 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0 GSM967515,0,0.03 GSM967516,0,0.008 GSM967517,0,4.13 GSM967518,0,0.01 GSM967519,0,5.264 GSM967520,0,0.504 GSM967521,0,4.501 GSM967535,0,18.114 GSM967536,0,0.006 GSM967537,0,0.018 GSM967538,0,2.97 GSM967539,0,0.006 GSM967540,0,5.955 GSM967541,0,0.008 GSM967542,0,0.312 GSM967543,0,2.76 GSM967544,0,5.403 GSM967545,0,33.041 GSM967546,0,89.089 GSM967547,0,15.147 GSM967548,0,21.785 GSM967549,0,26.194 GSM967550,0,29.913 GSM967551,0,5.558 GSM967552,0,5.364 GSM967553,0,3.911 GSM967554,0,0.022 GSM967555,0,33.856 GSM967556,0,4.428 GSM967557,0,51.256
| Synonyms | CHS;CHS1 |
| Description | lysosomal trafficking regulator |
|---|---|
| Chromosome | 1q42.1-q42.2 |
| Database Reference | MIM:606897 HGNC:1968 HPRD:06060 Vega:OTTHUMG00000040527 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| LYST expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.03 |
| LNCaP cell | 0.008 | 2.317 | 5.264 |
| NG2-sorted cell from blood | 0.006 | 1.494 | 18.114 |
| PC3 cell | 0.008 | 1.536 | 5.403 |
| Primary melanocyte | 33.041 | 61.065 | 89.089 |
| SKMEL5 cell | 15.147 | 23.989 | 29.913 |
| T24 cell | 0.022 | 4.637 | 5.558 |
| UACC257 cell | 4.428 | 33.856 | 51.256 |
| Comparing LYST expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.000360640775084023 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.000902426610864397 |
| Embryonic stem cell VS PC3 cell | 0.00419594157881095 |
| Embryonic stem cell VS Primary melanocyte | 0.00802635659108352 |
| Embryonic stem cell VS SKMEL5 cell | 0.000374268441248178 |
| Embryonic stem cell VS T24 cell | 0.00145186049161875 |
| Embryonic stem cell VS UACC257 cell | 0.00222558622011732 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.017958874682444 |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
