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| Synonyms | HCN;LINC00047;NCRNA00047;NEAT2;PRO2853;mascRNA |
| Description | metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) |
|---|---|
| Chromosome | 11q13.1 |
| Database Reference | MIM:607924 HGNC:29665 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67835 |
| MALAT1 expression in each cell group | Minimum Value (Read count) | Median Value (Read count) | Maximum Value (Read count) |
|---|---|---|---|
| cortex astrocytes | 7,624 | 17,946 | 29,842 |
| cortex endothelial | 4,747 | 7,588 | 26,322 |
| cortex fetal-quiescent | 1,709 | 5,392 | 10,943 |
| cortex fetal-replicating | 2,302 | 6,067 | 14,436 |
| cortex hybrid | 723 | 11,768.5 | 22,831 |
| cortex microglia | 2,687 | 10,365.5 | 14,083 |
| cortex neurons | 848 | 9,484 | 31,850 |
| cortex oligodendrocytes | 2,218 | 9,438 | 16,280 |
| cortex OPC | 5,387 | 8,451.5 | 11,516 |
| hippocampus endothelial | 6,960 | 7,027 | 10,098 |
| hippocampus hybrid | 4,533 | 5,422 | 6,311 |
| hippocampus microglia | 4,078 | 9,136 | 19,302 |
| hippocampus neurons | 8,652 | 8,652 | 8,652 |
| hippocampus oligodendrocytes | 5,826 | 6,713.5 | 8,634 |
| hippocampus OPC | 4,774 | 8,017 | 12,859 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others cortex astrocytes[62]
cortex endothelial[17]
cortex fetal-quiescent[110]
cortex fetal-replicating[25]
cortex hybrid[44]
cortex microglia[8]
cortex neurons[130]
cortex oligodendrocytes[32]
cortex OPC[2]
hippocampus endothelial[3]
hippocampus hybrid[2]
hippocampus microglia[8]
hippocampus neurons[1]
hippocampus oligodendrocytes[6]
hippocampus OPC[16]
