gene,0,0 GSM1643170,0,131.853 GSM1643171,0,176.323 GSM1643147,0,166.213 GSM1643148,0,206.898 GSM1643172,0,180.735 GSM1643173,0,167.427 GSM1643174,0,129.822 GSM1643175,0,191.904 GSM1643176,0,168.123 GSM1643149,0,175.913 GSM1643150,0,169.475 GSM1643177,0,193.695 GSM1643178,0,167.503 GSM1643179,0,182.473 GSM1643151,0,153.507 GSM1643152,0,201.035 GSM1643157,0,152.929 GSM1643158,0,123.311 GSM1643163,0,105.818 GSM1643164,0,157.726 GSM1643153,0,133.997 GSM1643154,0,184.171 GSM1643143,0,261.899 GSM1643144,0,247.536 GSM1643155,0,253.218 GSM1643156,0,196.526 GSM1643159,0,205.719 GSM1643160,0,207.15 GSM1643165,0,214.32 GSM1643166,0,196.522 GSM1643167,0,189.037 GSM1643168,0,215.872 GSM1643169,0,259.61 GSM1643145,0,200.783 GSM1643146,0,223.582 GSM1643161,0,164.708 GSM1643162,0,189.555
Synonyms | COCA1;FCC1;HNPCC;HNPCC1;LCFS2 |
Description | mutS homolog 2 |
---|---|
Chromosome | 2p21 |
Database Reference | MIM:609309 HGNC:7325 HPRD:00389 Vega:OTTHUMG00000128861 |
See related | THE HUMAN PROTEIN ATLAS |
Dataset | GSE67259 |
MSH2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
---|---|---|---|
d2 AG+ cells | 131.853 | 154.088 | 176.323 |
d2 BTAG+ cells | 129.822 | 167.427 | 206.898 |
d4 AG+ cells | 168.123 | 180.014 | 191.904 |
d4 BTAG+ cells | 167.503 | 175.913 | 193.695 |
d6 BTAG+ cells | 123.311 | 153.218 | 201.035 |
d6 CSM+ cells | 105.818 | 131.772 | 157.726 |
d8 BTAG+ cells | 133.997 | 159.084 | 184.171 |
hiPSC | 189.037 | 214.32 | 261.899 |
iMeLC | 164.708 | 195.169 | 223.582 |
Comparing MSH2 expression between groups | FDR |
---|---|
d4 AG+ cells VS iMeLC | NS |
d4 BTAG+ cells VS d6 BTAG+ cells | NS |
d4 BTAG+ cells VS d6 CSM+ cells | NS |
d4 BTAG+ cells VS d8 BTAG+ cells | NS |
d4 BTAG+ cells VS hiPSC | 0.00925648930641217 |
d4 BTAG+ cells VS iMeLC | NS |
d6 BTAG+ cells VS d6 CSM+ cells | NS |
d6 BTAG+ cells VS d8 BTAG+ cells | NS |
d6 BTAG+ cells VS hiPSC | 0.00563779142710012 |
d6 BTAG+ cells VS iMeLC | NS |
d6 CSM+ cells VS d8 BTAG+ cells | NS |
d6 CSM+ cells VS hiPSC | 0.0040864037501245 |
d6 CSM+ cells VS iMeLC | NS |
d8 BTAG+ cells VS hiPSC | 0.0290201593197168 |
d8 BTAG+ cells VS iMeLC | NS |
hiPSC VS iMeLC | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]