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Gene View

General Information

MSX1[ENSG00000163132]

SynonymsECTD3;HOX7;HYD1;STHAG1
Descriptionmsh homeobox 1
Chromosome4p16.2
Database ReferenceMIM:142983 HGNC:7391 HPRD:00866 Vega:OTTHUMG00000090335 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
MSX1 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]00226.791
fetal human cortex 1[12 weeks post-conception]00392.489
fetal human cortex 2[13 weeks post-conception]007.993
iPSC 409B2[33 days]00218.558
iPSC 409B2[35 days]00126.498
iPSC 409B2[37 days]00291.782
iPSC 409B2[41 days]00415.145
iPSC 409B2[58 days]00407.496
iPSC 409B2[65 days]00236.9
Displaying 1-20 of 36 results.
Comparing MSX1 expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]NS
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]NS
ESC H9[53 days] VS iPSC 409B2[33 days]NS
ESC H9[53 days] VS iPSC 409B2[35 days]NS
ESC H9[53 days] VS iPSC 409B2[37 days]NS
ESC H9[53 days] VS iPSC 409B2[41 days]0.000321521876707877
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]0.00460262714080328
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]0.0106825694096875
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]0.0112212284729786
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]0.00617161298192393
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]2.32495631585676e-06
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]7.20104058777297e-09
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]0.0012457325216643
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for MSX1

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]