gene,0,0 GSM967508,0,0.038 GSM967509,0,0.039 GSM967510,0,0.035 GSM967511,0,0.045 GSM967512,0,0.038 GSM967513,0,0.086 GSM967514,0,0 GSM967515,0,0.044 GSM967516,0,527.233 GSM967517,0,417.303 GSM967518,0,66.037 GSM967519,0,255.538 GSM967520,0,71.319 GSM967521,0,116.87 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0.028 GSM967540,0,0.032 GSM967541,0,8.303 GSM967542,0,308.936 GSM967543,0,9.415 GSM967544,0,5.178 GSM967545,0,2.518 GSM967546,0,0.281 GSM967547,0,0.443 GSM967548,0,25.133 GSM967549,0,3.939 GSM967550,0,1.726 GSM967551,0,0.09 GSM967552,0,19.934 GSM967553,0,0 GSM967554,0,0.097 GSM967555,0,3.682 GSM967556,0,3.187 GSM967557,0,8.664
| Synonyms | CAP43;CMT4D;DRG-1;DRG1;GC4;HMSNL;NDR1;NMSL;PROXY1;RIT42;RTP;TARG1;TDD5 |
| Description | N-myc downstream regulated 1 |
|---|---|
| Chromosome | 8q24.3 |
| Database Reference | MIM:605262 HGNC:7679 HPRD:05586 Vega:OTTHUMG00000164441 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| NDRG1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.039 | 0.086 |
| LNCaP cell | 66.037 | 186.204 | 527.233 |
| NG2-sorted cell from blood | 0 | 0 | 0.032 |
| PC3 cell | 5.178 | 8.859 | 308.936 |
| Primary melanocyte | 0.281 | 1.399 | 2.518 |
| SKMEL5 cell | 0.443 | 2.832 | 25.133 |
| T24 cell | 0 | 0.093 | 19.934 |
| UACC257 cell | 3.187 | 3.682 | 8.664 |
| Comparing NDRG1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 1.57464689061572e-07 |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | 0.000327608137497161 |
| Embryonic stem cell VS Primary melanocyte | 0.0159972772816116 |
| Embryonic stem cell VS SKMEL5 cell | 0.000980131187634965 |
| Embryonic stem cell VS T24 cell | 0.00473153454659762 |
| Embryonic stem cell VS UACC257 cell | 0.00032839501495015 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.0278898866211922 |
| LNCaP cell VS T24 cell | 0.0397707354807344 |
| LNCaP cell VS UACC257 cell | 0.0197630785878564 |
| NG2-sorted cell from blood VS PC3 cell | 0.00368300067285318 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.0141906550785703 |
| NG2-sorted cell from blood VS T24 cell | 0.0191835440280598 |
| NG2-sorted cell from blood VS UACC257 cell | 0.0387440887303932 |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
