gene,0,0 GSM967508,0,0 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0.04 GSM967514,0,0 GSM967515,0,0 GSM967516,0,2293.039 GSM967517,0,21.601 GSM967518,0,1995.635 GSM967519,0,2883.156 GSM967520,0,2511.49 GSM967521,0,2927.193 GSM967535,0,0.039 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0 GSM967540,0,0 GSM967541,0,0.127 GSM967542,0,0.233 GSM967543,0,0.035 GSM967544,0,14.169 GSM967545,0,0 GSM967546,0,0 GSM967547,0,13.123 GSM967548,0,0 GSM967549,0,14.278 GSM967550,0,15.471 GSM967551,0,28.919 GSM967552,0,30.197 GSM967553,0,9.294 GSM967554,0,25.616 GSM967555,0,0 GSM967556,0,0.855 GSM967557,0,17.698
| Synonyms | BAPX2;NKX3;NKX3.1;NKX3A |
| Description | NK3 homeobox 1 |
|---|---|
| Chromosome | 8p21.2 |
| Database Reference | MIM:602041 HGNC:7838 HPRD:03620 Vega:OTTHUMG00000097851 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| NKX3-1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.04 |
| LNCaP cell | 21.601 | 2,402.265 | 2,927.193 |
| NG2-sorted cell from blood | 0 | 0 | 0.039 |
| PC3 cell | 0.035 | 0.18 | 14.169 |
| Primary melanocyte | 0 | 0 | 0 |
| SKMEL5 cell | 0 | 13.7 | 15.471 |
| T24 cell | 9.294 | 27.267 | 30.197 |
| UACC257 cell | 0 | 0.855 | 17.698 |
| Comparing NKX3-1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.00299182252037101 |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | 0.0149263814453361 |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | 0.00340021252801398 |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.000336795560817693 |
| LNCaP cell VS T24 cell | 0.000251696812774042 |
| LNCaP cell VS UACC257 cell | 0.0086093785545711 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.0220465138437048 |
| NG2-sorted cell from blood VS T24 cell | 0.00428841160116388 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
