gene,0,0 GSM967508,0,0 GSM967509,0,0 GSM967510,0,0.08 GSM967511,0,0.102 GSM967512,0,0 GSM967513,0,0.049 GSM967514,0,0.045 GSM967515,0,0.253 GSM967516,0,0 GSM967517,0,0.036 GSM967518,0,0.095 GSM967519,0,0.06 GSM967520,0,0.073 GSM967521,0,0.045 GSM967535,0,0.769 GSM967536,0,203.944 GSM967537,0,49.389 GSM967538,0,79.428 GSM967539,0,75.501 GSM967540,0,42.368 GSM967541,0,0 GSM967542,0,0 GSM967543,0,0.042 GSM967544,0,0 GSM967545,0,322.235 GSM967546,0,232.572 GSM967547,0,7.101 GSM967548,0,2.804 GSM967549,0,0.729 GSM967550,0,41.164 GSM967551,0,0 GSM967552,0,0.064 GSM967553,0,0 GSM967554,0,0.037 GSM967555,0,32.599 GSM967556,0,0.04 GSM967557,0,23.349
| Synonyms | RPEL;RPEL1;dJ257A7.2 |
| Description | phosphatase and actin regulator 1 |
|---|---|
| Chromosome | 6p24.1 |
| Database Reference | MIM:608723 HGNC:20990 HPRD:12283 Vega:OTTHUMG00000014270 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| PHACTR1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.047 | 0.253 |
| LNCaP cell | 0 | 0.052 | 0.095 |
| NG2-sorted cell from blood | 0.769 | 62.445 | 203.944 |
| PC3 cell | 0 | 0 | 0.042 |
| Primary melanocyte | 232.572 | 277.404 | 322.235 |
| SKMEL5 cell | 0.729 | 4.953 | 41.164 |
| T24 cell | 0 | 0.018 | 0.064 |
| UACC257 cell | 0.04 | 23.349 | 32.599 |
| Comparing PHACTR1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 5.58725202160716e-05 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.00580223516537629 |
| Embryonic stem cell VS SKMEL5 cell | 0.00384983597298934 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.00699949204902659 |
| LNCaP cell VS NG2-sorted cell from blood | 2.32634829525129e-05 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | 0.00334154809571789 |
| LNCaP cell VS SKMEL5 cell | 0.00297959768309689 |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | 0.00302953759298501 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
