gene,0,0 GSM967508,0,0.059 GSM967509,0,0.06 GSM967510,0,0 GSM967511,0,0.137 GSM967512,0,0 GSM967513,0,0.066 GSM967514,0,0 GSM967515,0,0.068 GSM967516,0,39.197 GSM967517,0,81.613 GSM967518,0,50.907 GSM967519,0,22.249 GSM967520,0,12.74 GSM967521,0,0 GSM967535,0,161.633 GSM967536,0,0 GSM967537,0,80.19 GSM967538,0,71.049 GSM967539,0,7.693 GSM967540,0,97.428 GSM967541,0,32.959 GSM967542,0,34.695 GSM967543,0,93.33 GSM967544,0,121.348 GSM967545,0,185.782 GSM967546,0,130.678 GSM967547,0,76.136 GSM967548,0,144.149 GSM967549,0,42.224 GSM967550,0,95.009 GSM967551,0,55.546 GSM967552,0,90.526 GSM967553,0,0 GSM967554,0,30.088 GSM967555,0,46.299 GSM967556,0,119.246 GSM967557,0,145.475
| Synonyms | PTD016 |
| Description | ring finger protein, transmembrane 1 |
|---|---|
| Chromosome | 17q23.1 |
| Database Reference | MIM:615172 HGNC:30206 HPRD:17925 Vega:OTTHUMG00000148658 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| RNFT1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.059 | 0.137 |
| LNCaP cell | 0 | 30.723 | 81.613 |
| NG2-sorted cell from blood | 0 | 75.619 | 161.633 |
| PC3 cell | 32.959 | 64.012 | 121.348 |
| Primary melanocyte | 130.678 | 158.23 | 185.782 |
| SKMEL5 cell | 42.224 | 85.572 | 144.149 |
| T24 cell | 0 | 42.817 | 90.526 |
| UACC257 cell | 46.299 | 119.246 | 145.475 |
| Comparing RNFT1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 1.18173470674256e-05 |
| Embryonic stem cell VS NG2-sorted cell from blood | 8.73660999339718e-06 |
| Embryonic stem cell VS PC3 cell | 9.59977801809774e-05 |
| Embryonic stem cell VS Primary melanocyte | 0.00269356861921599 |
| Embryonic stem cell VS SKMEL5 cell | 5.5311876057464e-05 |
| Embryonic stem cell VS T24 cell | 0.000232638650451556 |
| Embryonic stem cell VS UACC257 cell | 0.00032839501495015 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
