Gene View

General Information

SCAF1[ENSG00000126461]

SynonymsSRA1
DescriptionSR-related CTD associated factor 1
Chromosome19q13.3-q13.4
Database ReferenceHGNC:30403 HPRD:11604 Vega:OTTHUMG00000183238 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE86982

Gene Rank

Created with Highcharts 4.2.5RankRank of SCAF1 Expression in GSE86982cultured embryonic stem cells[DCX+][RM165051]cultured embryonic stem cells[DCX+][BG121099]cultured embryonic stem cells[DCX-][BG121099]cultured embryonic stem cells[DCX+][BG121095]cultured embryonic stem cells[DCX-][RM165051]cultured embryonic stem cells[RM165095][viral_barcoded]cultured embryonic stem cells[DCX-][BG121095]cultured embryonic stem cells[DCX-][RM165049]cultured embryonic stem cells[DCX+][RM165049]cultured embryonic stem cells[DCX+][RM165048]cultured embryonic stem cells[DCX-][RM165051][viral_barcoded]cultured embryonic stem cells[DCX+][RM165051][viral_barcoded]cultured embryonic stem cells[DCX-][RM165048]0102030405060708090100

Gene Expression

Created with Highcharts 4.2.5

 

Created with Highcharts 4.2.5Cell GroupGene Expression Level (TPM)SCAF1 Expression in Each Cell Groupculturedembryonicstemcells[DCX-][BG121095]cultured embryonic stem cells[DCX-][BG121095]culturedembryonicstemcells[DCX-][BG121099]cultured embryonic stem cells[DCX-][BG121099]culturedembryonicstemcells[DCX-][RM165048]cultured embryonic stem cells[DCX-][RM165048]culturedembryonicstemcells[DCX-][RM165049]cultured embryonic stem cells[DCX-][RM165049]culturedembryonicstemcells[DCX-][RM165051]cultured embryonic stem cells[DCX-][RM165051]cultured embr…cultured embryonic stem cells[DCX-][RM165051][viral_barcoded]cultured embr…cultured embryonic stem cells[DCX+][BG121095]cultured embr…cultured embryonic stem cells[DCX+][BG121099]cultured embr…cultured embryonic stem cells[DCX+][RM165048]cultured embr…cultured embryonic stem cells[DCX+][RM165049]cultured embr…cultured embryonic stem cells[DCX+][RM165051]cultured embr…cultured embryonic stem cells[DCX+][RM165051][viral_barcoded]cultured embr…cultured embryonic stem cells[RM165095][viral_barcoded]0204060-2080
Displaying 1-20 of 78 results.
Comparing SCAF1 expression between groupsFDR
cultured embryonic stem cells[DCX+][BG121095] VS cultured embryonic stem cells[DCX+][BG121099]0.0243111846903074
cultured embryonic stem cells[DCX+][BG121095] VS cultured embryonic stem cells[DCX+][RM165048]0.00981912821316399
cultured embryonic stem cells[DCX+][BG121095] VS cultured embryonic stem cells[DCX+][RM165049]NS
cultured embryonic stem cells[DCX+][BG121095] VS cultured embryonic stem cells[DCX+][RM165051]NS
cultured embryonic stem cells[DCX+][BG121095] VS cultured embryonic stem cells[DCX+][RM165051][viral VS barcoded]0.000786637543110467
cultured embryonic stem cells[DCX+][BG121095] VS cultured embryonic stem cells[RM165095][viral VS barcoded]NS
cultured embryonic stem cells[DCX+][BG121099] VS cultured embryonic stem cells[DCX+][RM165048]3.27276343012576e-05
cultured embryonic stem cells[DCX+][BG121099] VS cultured embryonic stem cells[DCX+][RM165049]1.83094280194274e-05
cultured embryonic stem cells[DCX+][BG121099] VS cultured embryonic stem cells[DCX+][RM165051]NS
cultured embryonic stem cells[DCX+][BG121099] VS cultured embryonic stem cells[DCX+][RM165051][viral VS barcoded]3.08752826650434e-06
cultured embryonic stem cells[DCX+][BG121099] VS cultured embryonic stem cells[RM165095][viral VS barcoded]0.00991460110526566
cultured embryonic stem cells[DCX+][RM165048] VS cultured embryonic stem cells[DCX+][RM165049]NS
cultured embryonic stem cells[DCX+][RM165048] VS cultured embryonic stem cells[DCX+][RM165051]0.000651516032825411
cultured embryonic stem cells[DCX+][RM165048] VS cultured embryonic stem cells[DCX+][RM165051][viral VS barcoded]NS
cultured embryonic stem cells[DCX+][RM165048] VS cultured embryonic stem cells[RM165095][viral VS barcoded]0.0018051681934512
cultured embryonic stem cells[DCX+][RM165049] VS cultured embryonic stem cells[DCX+][RM165051]0.000382686259487969
cultured embryonic stem cells[DCX+][RM165049] VS cultured embryonic stem cells[DCX+][RM165051][viral VS barcoded]NS
cultured embryonic stem cells[DCX+][RM165049] VS cultured embryonic stem cells[RM165095][viral VS barcoded]0.0175126775308704
cultured embryonic stem cells[DCX+][RM165051][viral VS barcoded] VS cultured embryonic stem cells[RM165095][viral VS barcoded]0.000128774488152856
cultured embryonic stem cells[DCX+][RM165051] VS cultured embryonic stem cells[DCX+][RM165051][viral VS barcoded]3.62377502581846e-05
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for SCAF1

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others