gene,0,0 GSM967508,0,0 GSM967509,0,0.02 GSM967510,0,0.009 GSM967511,0,0.012 GSM967512,0,0 GSM967513,0,0.146 GSM967514,0,10.146 GSM967515,0,0.012 GSM967516,0,0.035 GSM967517,0,0.016 GSM967518,0,0 GSM967519,0,0.02 GSM967520,0,0.025 GSM967521,0,0.01 GSM967535,0,0.011 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0.555 GSM967540,0,8.868 GSM967541,0,0.026 GSM967542,0,1.37 GSM967543,0,0.039 GSM967544,0,0.058 GSM967545,0,68.408 GSM967546,0,86.084 GSM967547,0,72.749 GSM967548,0,122.057 GSM967549,0,91.458 GSM967550,0,22.79 GSM967551,0,0.024 GSM967552,0,0.109 GSM967553,0,0.048 GSM967554,0,0.059 GSM967555,0,53.307 GSM967556,0,78.887 GSM967557,0,30.166
| Synonyms | SEMAF;semF |
| Description | semaphorin 5A |
|---|---|
| Chromosome | 5p15.2 |
| Database Reference | MIM:609297 HGNC:10736 HPRD:10219 Vega:OTTHUMG00000090501 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SEMA5A expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.012 | 10.146 |
| LNCaP cell | 0 | 0.018 | 0.035 |
| NG2-sorted cell from blood | 0 | 0.005 | 8.868 |
| PC3 cell | 0.026 | 0.048 | 1.37 |
| Primary melanocyte | 68.408 | 77.246 | 86.084 |
| SKMEL5 cell | 22.79 | 82.104 | 122.057 |
| T24 cell | 0.024 | 0.053 | 0.109 |
| UACC257 cell | 30.166 | 53.307 | 78.887 |
| Comparing SEMA5A expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.0364963952902082 |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.0288686355929915 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | 0.0034380689302938 |
| LNCaP cell VS SKMEL5 cell | 4.7444823389515e-05 |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | 0.000543663981192675 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.0456447873228365 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
