gene,0,0 GSM1657885,0,0 GSM1657932,0,708 GSM1657938,0,539 GSM1657965,0,53 GSM1657969,0,133 GSM1657975,0,404 GSM1657979,0,1416 GSM1657981,0,209 GSM1657992,0,200 GSM1657998,0,596 GSM1658000,0,329 GSM1658006,0,645 GSM1658007,0,398 GSM1658010,0,367 GSM1658016,0,15 GSM1658017,0,189 GSM1658020,0,136 GSM1658021,0,391 GSM1658026,0,91 GSM1658027,0,95 GSM1658029,0,1881 GSM1658031,0,82 GSM1658043,0,426 GSM1658045,0,160 GSM1658048,0,457 GSM1658049,0,1031 GSM1658050,0,154 GSM1658051,0,61 GSM1658053,0,102 GSM1658054,0,212 GSM1658055,0,57 GSM1658056,0,1183 GSM1658059,0,452 GSM1658060,0,416 GSM1658061,0,556 GSM1658062,0,1144 GSM1658064,0,934 GSM1658065,0,938 GSM1658066,0,241 GSM1658067,0,11 GSM1658068,0,557 GSM1658069,0,810 GSM1658071,0,712 GSM1658072,0,8 GSM1658073,0,352 GSM1658078,0,59 GSM1658079,0,608 GSM1658081,0,1 GSM1658082,0,690 GSM1658142,0,278 GSM1658168,0,727 GSM1658174,0,836 GSM1658184,0,348 GSM1658185,0,121 GSM1658186,0,0 GSM1658187,0,8 GSM1658190,0,61 GSM1658191,0,105 GSM1658193,0,156 GSM1658199,0,136 GSM1658201,0,1174 GSM1658202,0,117 GSM1657972,0,450 GSM1657993,0,1942 GSM1657995,0,0 GSM1658004,0,0 GSM1658083,0,59 GSM1658085,0,9 GSM1658086,0,5 GSM1658089,0,23 GSM1658092,0,218 GSM1658094,0,1 GSM1658096,0,22 GSM1658098,0,17 GSM1658099,0,240 GSM1658100,0,404 GSM1658102,0,18 GSM1658109,0,35 GSM1658112,0,0 GSM1658003,0,0 GSM1658221,0,0 GSM1658223,0,0 GSM1658225,0,0 GSM1658226,0,0 GSM1658227,0,0 GSM1658229,0,0 GSM1658230,0,1 GSM1658231,0,0 GSM1658232,0,0 GSM1658233,0,0 GSM1658234,0,88 GSM1658235,0,0 GSM1658236,0,0 GSM1658237,0,0 GSM1658238,0,0 GSM1658239,0,27 GSM1658240,0,0 GSM1658241,0,0 GSM1658243,0,0 GSM1658244,0,0 GSM1658245,0,0 GSM1658246,0,0 GSM1658247,0,0 GSM1658248,0,0 GSM1658249,0,0 GSM1658251,0,0 GSM1658253,0,46 GSM1658255,0,53 GSM1658257,0,0 GSM1658259,0,0 GSM1658262,0,0 GSM1658264,0,63 GSM1658266,0,1 GSM1658268,0,0 GSM1658270,0,47 GSM1658272,0,0 GSM1658275,0,0 GSM1658277,0,0 GSM1658279,0,0 GSM1658281,0,0 GSM1658284,0,0 GSM1658286,0,0 GSM1658288,0,0 GSM1658290,0,0 GSM1658292,0,0 GSM1658294,0,0 GSM1658297,0,45 GSM1658299,0,0 GSM1658301,0,0 GSM1658305,0,0 GSM1658306,0,1 GSM1658307,0,0 GSM1658308,0,0 GSM1658309,0,0 GSM1658310,0,0 GSM1658311,0,0 GSM1658312,0,0 GSM1658313,0,0 GSM1658314,0,0 GSM1658315,0,0 GSM1658316,0,1 GSM1658317,0,0 GSM1658318,0,0 GSM1658319,0,0 GSM1658320,0,27 GSM1658321,0,0 GSM1658322,0,0 GSM1658323,0,0 GSM1658324,0,0 GSM1658325,0,0 GSM1658326,0,0 GSM1658327,0,0 GSM1658328,0,0 GSM1658329,0,128 GSM1658330,0,0 GSM1658331,0,0 GSM1658332,0,0 GSM1658333,0,0 GSM1658334,0,0 GSM1658335,0,0 GSM1658336,0,0 GSM1658337,0,0 GSM1658338,0,0 GSM1658339,0,63 GSM1658340,0,160 GSM1658341,0,5 GSM1658342,0,866 GSM1658343,0,1 GSM1658344,0,0 GSM1658345,0,8 GSM1658346,0,11 GSM1658348,0,1 GSM1658349,0,1 GSM1658350,0,2 GSM1658351,0,4 GSM1658352,0,2 GSM1658353,0,0 GSM1658354,0,0 GSM1658356,0,0 GSM1658357,0,0 GSM1658358,0,0 GSM1658359,0,1359 GSM1658360,0,695 GSM1658361,0,0 GSM1658362,0,0 GSM1658363,0,0 GSM1658364,0,0 GSM1658365,0,0 GSM1658366,0,0 GSM1658203,0,0 GSM1658204,0,0 GSM1658205,0,0 GSM1658206,0,0 GSM1658207,0,0 GSM1658208,0,103 GSM1658209,0,0 GSM1658210,0,0 GSM1658211,0,0 GSM1658212,0,0 GSM1658213,0,0 GSM1658214,0,258 GSM1658215,0,0 GSM1658216,0,1 GSM1658217,0,0 GSM1658218,0,0 GSM1658219,0,0 GSM1658220,0,0 GSM1658222,0,1 GSM1658224,0,0 GSM1658228,0,0 GSM1658242,0,0 GSM1658304,0,0 GSM1658347,0,3 GSM1658355,0,0 GSM1657872,0,893 GSM1657874,0,167 GSM1657875,0,0 GSM1657878,0,301 GSM1657879,0,95 GSM1657880,0,74 GSM1657882,0,124 GSM1657883,0,819 GSM1657884,0,1057 GSM1657886,0,317 GSM1657887,0,993 GSM1657888,0,814 GSM1657895,0,102 GSM1657896,0,601 GSM1657897,0,104 GSM1657929,0,235 GSM1657936,0,674 GSM1657947,0,16 GSM1658008,0,945 GSM1658011,0,1147 GSM1658013,0,243 GSM1658015,0,281 GSM1658019,0,1321 GSM1658022,0,479 GSM1658023,0,388 GSM1658024,0,175 GSM1658028,0,1988 GSM1658030,0,282 GSM1658036,0,28 GSM1658044,0,587 GSM1658047,0,951 GSM1658057,0,953 GSM1658070,0,634 GSM1658074,0,2217 GSM1658075,0,1477 GSM1658076,0,646 GSM1658077,0,233 GSM1658132,0,282 GSM1658144,0,64 GSM1658154,0,0 GSM1658161,0,4 GSM1658165,0,511 GSM1658178,0,123 GSM1658183,0,2 GSM1657934,0,1 GSM1657994,0,0 GSM1657996,0,0 GSM1657997,0,0 GSM1657999,0,0 GSM1658188,0,0 GSM1658189,0,0 GSM1658196,0,0 GSM1657930,0,71 GSM1657931,0,199 GSM1657933,0,49 GSM1657935,0,22 GSM1657937,0,32 GSM1657939,0,238 GSM1657940,0,189 GSM1657941,0,11 GSM1657942,0,2 GSM1657943,0,397 GSM1657945,0,302 GSM1657946,0,250 GSM1657948,0,405 GSM1657949,0,77 GSM1657950,0,435 GSM1657951,0,157 GSM1657952,0,925 GSM1657953,0,265 GSM1657954,0,0 GSM1657955,0,60 GSM1657956,0,550 GSM1657957,0,0 GSM1657958,0,186 GSM1657959,0,5 GSM1657960,0,0 GSM1657961,0,0 GSM1657962,0,0 GSM1657963,0,274 GSM1657964,0,759 GSM1657966,0,174 GSM1657967,0,516 GSM1657968,0,475 GSM1657970,0,391 GSM1657971,0,49 GSM1657973,0,308 GSM1657974,0,390 GSM1657976,0,4 GSM1657977,0,98 GSM1657978,0,0 GSM1657980,0,1372 GSM1657982,0,1524 GSM1657983,0,18 GSM1657984,0,83 GSM1657985,0,880 GSM1657986,0,41 GSM1657987,0,39 GSM1657988,0,634 GSM1657989,0,807 GSM1657990,0,412 GSM1657991,0,683 GSM1658001,0,60 GSM1658002,0,204 GSM1658005,0,375 GSM1658009,0,598 GSM1658012,0,229 GSM1658014,0,862 GSM1658025,0,367 GSM1658032,0,2 GSM1658033,0,668 GSM1658034,0,1107 GSM1658035,0,2703 GSM1658037,0,380 GSM1658038,0,6 GSM1658039,0,2962 GSM1658040,0,682 GSM1658041,0,4 GSM1658042,0,468 GSM1658046,0,243 GSM1658052,0,140 GSM1658058,0,679 GSM1658063,0,4 GSM1658080,0,572 GSM1658084,0,0 GSM1658087,0,906 GSM1658090,0,72 GSM1658091,0,982 GSM1658095,0,1421 GSM1658101,0,606 GSM1658103,0,1595 GSM1658104,0,606 GSM1658105,0,399 GSM1658106,0,935 GSM1658107,0,215 GSM1658108,0,863 GSM1658110,0,628 GSM1658111,0,298 GSM1658113,0,116 GSM1658114,0,23 GSM1658115,0,576 GSM1658127,0,1063 GSM1658128,0,44 GSM1658129,0,841 GSM1658131,0,42 GSM1658134,0,280 GSM1658135,0,216 GSM1658136,0,870 GSM1658137,0,69 GSM1658138,0,1253 GSM1658139,0,70 GSM1658141,0,661 GSM1658143,0,323 GSM1658145,0,0 GSM1658146,0,210 GSM1658147,0,990 GSM1658148,0,947 GSM1658149,0,96 GSM1658150,0,120 GSM1658151,0,394 GSM1658152,0,1532 GSM1658153,0,289 GSM1658156,0,971 GSM1658158,0,242 GSM1658160,0,1392 GSM1658163,0,221 GSM1658166,0,113 GSM1658169,0,2 GSM1658170,0,120 GSM1658171,0,1767 GSM1658172,0,1096 GSM1658175,0,80 GSM1658176,0,265 GSM1658177,0,476 GSM1658181,0,199 GSM1658182,0,75 GSM1658192,0,1072 GSM1658194,0,151 GSM1658195,0,1 GSM1658197,0,425 GSM1658198,0,42 GSM1658200,0,0 GSM1657871,0,2 GSM1657873,0,77 GSM1657876,0,23 GSM1657877,0,5 GSM1657881,0,123 GSM1657889,0,554 GSM1657890,0,11 GSM1657891,0,1 GSM1657892,0,1 GSM1657894,0,0 GSM1657898,0,15 GSM1657899,0,589 GSM1657900,0,30 GSM1657901,0,0 GSM1657902,0,0 GSM1657944,0,13 GSM1658018,0,32 GSM1658088,0,2 GSM1658093,0,50 GSM1658097,0,8 GSM1658130,0,4 GSM1658133,0,134 GSM1658140,0,276 GSM1658155,0,20 GSM1658157,0,89 GSM1658159,0,68 GSM1658162,0,106 GSM1658164,0,36 GSM1658167,0,0 GSM1658173,0,3 GSM1658179,0,125 GSM1658180,0,156 GSM1657893,0,34 GSM1657903,0,1 GSM1658117,0,489 GSM1658122,0,0 GSM1658126,0,1399 GSM1657905,0,13 GSM1657912,0,98 GSM1657910,0,20 GSM1657918,0,0 GSM1657919,0,0 GSM1657923,0,0 GSM1657925,0,0 GSM1657926,0,0 GSM1657927,0,0 GSM1658116,0,0 GSM1658121,0,99 GSM1658118,0,0 GSM1658119,0,0 GSM1658120,0,0 GSM1658123,0,0 GSM1658124,0,0 GSM1658125,0,0 GSM1657904,0,1 GSM1657906,0,121 GSM1657907,0,16 GSM1657908,0,11 GSM1657909,0,1 GSM1657911,0,2 GSM1657913,0,2 GSM1657914,0,239 GSM1657915,0,12 GSM1657916,0,8 GSM1657917,0,30 GSM1657920,0,1 GSM1657921,0,166 GSM1657922,0,0 GSM1657924,0,0 GSM1657928,0,5
| Synonyms | GABATHG;GABATR;GAT1;MAE |
| Description | solute carrier family 6 member 1 |
|---|---|
| Chromosome | 3p25.3 |
| Database Reference | MIM:137165 HGNC:11042 HPRD:00664 Vega:OTTHUMG00000044208 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67835 |
| SLC6A1 expression in each cell group | Minimum Value (Read count) | Median Value (Read count) | Maximum Value (Read count) |
|---|---|---|---|
| cortex astrocytes | 0 | 303.5 | 1,881 |
| cortex endothelial | 0 | 22 | 1,942 |
| cortex fetal-quiescent | 0 | 0 | 1,359 |
| cortex fetal-replicating | 0 | 0 | 258 |
| cortex hybrid | 0 | 309 | 2,217 |
| cortex microglia | 0 | 0 | 1 |
| cortex neurons | 0 | 265 | 2,962 |
| cortex oligodendrocytes | 0 | 21.5 | 589 |
| cortex OPC | 1 | 17.5 | 34 |
| hippocampus endothelial | 0 | 489 | 1,399 |
| hippocampus hybrid | 13 | 55.5 | 98 |
| hippocampus microglia | 0 | 0 | 20 |
| hippocampus neurons | 99 | 99 | 99 |
| hippocampus oligodendrocytes | 0 | 0 | 0 |
| hippocampus OPC | 0 | 6.5 | 239 |
| Comparing SLC6A1 expression between groups | FDR |
|---|---|
| cortex OPC VS hippocampus OPC | NS |
| cortex OPC VS hippocampus endothelial | NS |
| cortex OPC VS hippocampus hybrid | NS |
| cortex OPC VS hippocampus microglia | NS |
| cortex OPC VS hippocampus neurons | NS |
| cortex OPC VS hippocampus oligodendrocytes | NS |
| cortex astrocytes VS cortex OPC | 0.0132169937171107 |
| cortex astrocytes VS cortex endothelial | NS |
| cortex astrocytes VS cortex fetal-quiescent | 0.000996479922655227 |
| cortex astrocytes VS cortex fetal-replicating | 3.34769372385651e-07 |
| cortex astrocytes VS cortex hybrid | NS |
| cortex astrocytes VS cortex microglia | 2.54006591047367e-08 |
| cortex astrocytes VS cortex neurons | NS |
| cortex astrocytes VS cortex oligodendrocytes | 4.862977027858e-06 |
| cortex astrocytes VS hippocampus OPC | 9.7533363522935e-08 |
| cortex astrocytes VS hippocampus endothelial | NS |
| cortex astrocytes VS hippocampus hybrid | NS |
| cortex astrocytes VS hippocampus microglia | 1.88254717254214e-11 |
| cortex astrocytes VS hippocampus neurons | NS |
| cortex astrocytes VS hippocampus oligodendrocytes | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others cortex astrocytes[62]
cortex endothelial[17]
cortex fetal-quiescent[110]
cortex fetal-replicating[25]
cortex hybrid[44]
cortex microglia[8]
cortex neurons[130]
cortex oligodendrocytes[32]
cortex OPC[2]
hippocampus endothelial[3]
hippocampus hybrid[2]
hippocampus microglia[8]
hippocampus neurons[1]
hippocampus oligodendrocytes[6]
hippocampus OPC[16]
