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Gene View

General Information

SNCA[ENSG00000145335]

SynonymsNACP;PARK1;PARK4;PD1
Descriptionsynuclein alpha
Chromosome4q21
Database ReferenceMIM:163890 HGNC:11138 HPRD:01227 Vega:OTTHUMG00000130948 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
SNCA expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]00532.678
fetal human cortex 1[12 weeks post-conception]083.1951,043.111
fetal human cortex 2[13 weeks post-conception]00656.134
iPSC 409B2[33 days]00439.493
iPSC 409B2[35 days]00486.59
iPSC 409B2[37 days]00315.741
iPSC 409B2[41 days]00676.003
iPSC 409B2[58 days]001,066.125
iPSC 409B2[65 days]00746.789
Displaying 1-20 of 36 results.
Comparing SNCA expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]3.98797825410295e-06
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]NS
ESC H9[53 days] VS iPSC 409B2[33 days]NS
ESC H9[53 days] VS iPSC 409B2[35 days]NS
ESC H9[53 days] VS iPSC 409B2[37 days]NS
ESC H9[53 days] VS iPSC 409B2[41 days]NS
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]0.00432740314470722
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]4.61867491351822e-06
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]1.27283279838488e-09
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]1.390886837982e-08
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]2.80372594961067e-05
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]0.000177056169186655
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]0.0149994535809514
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]NS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for SNCA

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]