gene,0,0 GSM967508,0,333.212 GSM967509,0,602 GSM967510,0,1102.37 GSM967511,0,641.267 GSM967512,0,785.753 GSM967513,0,733.792 GSM967514,0,607.248 GSM967515,0,538.864 GSM967516,0,943.578 GSM967517,0,826.588 GSM967518,0,1068.419 GSM967519,0,1622.953 GSM967520,0,892.454 GSM967521,0,1152.533 GSM967535,0,409.79 GSM967536,0,400.233 GSM967537,0,627.589 GSM967538,0,242.371 GSM967539,0,423.27 GSM967540,0,147.511 GSM967541,0,88.654 GSM967542,0,106.986 GSM967543,0,132.439 GSM967544,0,0 GSM967545,0,433.755 GSM967546,0,367.458 GSM967547,0,540.708 GSM967548,0,459.319 GSM967549,0,289.18 GSM967550,0,428.878 GSM967551,0,145.155 GSM967552,0,221.124 GSM967553,0,175.163 GSM967554,0,115.028 GSM967555,0,765.75 GSM967556,0,912.422 GSM967557,0,856.535
| Synonyms | LINC00060;NCRNA00060 |
| Description | small nucleolar RNA host gene 8 |
|---|---|
| Chromosome | 4q26 |
| Database Reference | HGNC:33098 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SNHG8 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 333.212 | 624.258 | 1,102.37 |
| LNCaP cell | 826.588 | 1,005.999 | 1,622.953 |
| NG2-sorted cell from blood | 147.511 | 405.011 | 627.589 |
| PC3 cell | 0 | 97.82 | 132.439 |
| Primary melanocyte | 367.458 | 400.606 | 433.755 |
| SKMEL5 cell | 289.18 | 444.098 | 540.708 |
| T24 cell | 115.028 | 160.159 | 221.124 |
| UACC257 cell | 765.75 | 856.535 | 912.422 |
| Comparing SNHG8 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | 0.00274245741735217 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | 0.00273983871897075 |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.0135926298723453 |
| LNCaP cell VS PC3 cell | 0.00319427970280417 |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.0153670343348965 |
| LNCaP cell VS T24 cell | 0.000721470915178845 |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
