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GSM1853272,0,0 GSM1853280,0,0 GSM1853283,0,0 GSM1853284,0,981.541 GSM1853286,0,0 GSM1853287,0,4.75 GSM1853288,0,0 GSM1853290,0,0 GSM1853291,0,0 GSM1853292,0,0 GSM1853295,0,3.57 GSM1853298,0,0 GSM1853299,0,0 GSM1853301,0,0 GSM1853302,0,0 GSM1853304,0,0 GSM1853305,0,0 GSM1853307,0,0 GSM1853310,0,0 GSM1853312,0,0 GSM1853313,0,0 GSM1853314,0,4.03 GSM1853316,0,0 GSM1853321,0,0 GSM1853322,0,0 GSM1853324,0,0 GSM1853328,0,0 GSM1853330,0,0 GSM1853331,0,0 GSM1853334,0,0 GSM1853335,0,0 GSM1853337,0,0 GSM1853338,0,0 GSM1853340,0,0 GSM1853342,0,0 GSM1853343,0,0 GSM1853348,0,0 GSM1853350,0,0 GSM1853351,0,0 GSM1853352,0,0 GSM1853353,0,0 GSM1853354,0,0 GSM1853357,0,0 GSM1853358,0,0 GSM1853359,0,931.638 GSM1853360,0,0 GSM1853361,0,0 GSM1853365,0,0 GSM1853369,0,0 GSM1853375,0,0 GSM1853376,0,0 GSM1853380,0,4.05 GSM1853382,0,0 GSM1853387,0,0 GSM1853389,0,0 GSM1853391,0,0 GSM1853397,0,0 GSM1853398,0,0 GSM1853400,0,0 GSM1853401,0,0 GSM1853403,0,0 GSM1853404,0,0 GSM1853405,0,0 GSM1853414,0,0 GSM1853417,0,0 GSM1853419,0,0 GSM1853420,0,0 GSM1853425,0,0 GSM1853426,0,0 GSM1853427,0,0 GSM1853428,0,0 GSM1853429,0,0 GSM1853431,0,0 GSM1853432,0,0 GSM1853433,0,0 GSM1853436,0,0 GSM1853437,0,0 GSM1853439,0,111.729 GSM1853442,0,0 GSM1853444,0,0 GSM1853446,0,0 GSM1853450,0,0 GSM1853453,0,0 GSM1853457,0,0 GSM1853458,0,0 GSM1853461,0,0 GSM1853464,0,0 GSM1853469,0,5.46 GSM1853473,0,0 GSM1853474,0,0 GSM1853476,0,0 GSM1853477,0,6.39 GSM1853480,0,0 GSM1853483,0,0 GSM1853491,0,0 GSM1853492,0,0 GSM1853493,0,3.85 GSM1853494,0,0 GSM1853497,0,125.263 GSM1853501,0,0 GSM1853503,0,0 GSM1853504,0,0 GSM1853506,0,297.22 GSM1853507,0,0 GSM1853510,0,0 GSM1853515,0,0 GSM1853516,0,0 GSM1853519,0,0 GSM1853520,0,0 GSM1853521,0,0 GSM1853523,0,0 GSM1853524,0,0 GSM1853525,0,0 GSM1853526,0,0 GSM1853530,0,7 GSM1853543,0,0 GSM1853546,0,0 GSM1853550,0,2.94 GSM1853554,0,0 GSM1853559,0,0 GSM1853569,0,0 GSM1853574,0,0 GSM1853585,0,0 GSM1853588,0,0 GSM1853590,0,0 GSM1853592,0,0 GSM1853604,0,26.65 GSM1853608,0,0 GSM1853611,0,0 GSM1853612,0,0 GSM1853614,0,0 GSM1853615,0,8.12 GSM1853620,0,0 GSM1853622,0,0 GSM1853623,0,0 GSM1853628,0,0 GSM1853631,0,0 GSM1853633,0,0 GSM1853634,0,0 GSM1853635,0,0 GSM1853638,0,0 GSM1853639,0,0 GSM1853642,0,0 GSM1853643,0,0 GSM1853645,0,0 GSM1853646,0,0 GSM1853647,0,0 GSM1853651,0,8.11 GSM1853654,0,0 GSM1853655,0,0 GSM1853657,0,0 GSM1853660,0,0 GSM1853662,0,0 GSM1853668,0,0 GSM1853673,0,0 GSM1853674,0,0 GSM1853685,0,0 GSM1853687,0,0 GSM1853688,0,0 GSM1853690,0,0 GSM1850626,0,0 GSM1850630,0,34.04 GSM1850664,0,46.82 GSM1850763,0,12.43 GSM1850820,0,0 GSM1850829,0,0 GSM1850915,0,0 GSM1851284,0,0 GSM1851347,0,0 GSM1851355,0,0 GSM1851360,0,0 GSM1851383,0,19.761 GSM1851474,0,0 GSM1851515,0,21.141 GSM1851539,0,0 GSM1851567,0,0 GSM1851588,0,6.17 GSM1851592,0,0 GSM1851603,0,0 GSM1851614,0,19.88 GSM1851627,0,0 GSM1851715,0,0 GSM1851743,0,0 GSM1851774,0,14.891 GSM1851778,0,0 GSM1851842,0,15.709 GSM1851844,0,0 GSM1851848,0,0 GSM1851858,0,0 GSM1851874,0,31.67 GSM1851903,0,0 GSM1851913,0,0 GSM1851989,0,4.81 GSM1852002,0,0 GSM1852018,0,82.138 GSM1852031,0,108.392 GSM1852077,0,0 GSM1852134,0,0 GSM1852144,0,1.59 GSM1852348,0,19.779 GSM1852363,0,7.32 GSM1852454,0,0 GSM1852477,0,0 GSM1852562,0,0 GSM1852663,0,0 GSM1852708,0,0 GSM1852712,0,9.01 GSM1852713,0,0 GSM1852735,0,5.87 GSM1852744,0,0 GSM1852752,0,0 GSM1852757,0,0 GSM1852779,0,0 GSM1852781,0,0 GSM1852792,0,0 GSM1852832,0,0 GSM1852935,0,20.821 GSM1852936,0,0 GSM1852941,0,0 GSM1852991,0,0 GSM1853006,0,50.419 GSM1853011,0,0 GSM1853035,0,15.291 GSM1853080,0,125.695 GSM1853085,0,0 GSM1853138,0,0 GSM1853148,0,0 GSM1853166,0,14.941 GSM1853167,0,1.81 GSM1853198,0,3.74 GSM1853211,0,47.769 GSM1853234,0,0 GSM1853270,0,0 GSM1853289,0,0 GSM1853378,0,0 GSM1853406,0,46.1 GSM1853408,0,59.76 GSM1853500,0,0 GSM1853522,0,45.389 GSM1853649,0,2.65 GSM1853678,0,54.059 GSM1853681,0,0 GSM1853691,0,0 GSM1853692,0,48.179 GSM1853703,0,0 GSM1853709,0,20.249 GSM1853719,0,0 GSM1853724,0,35.77 GSM1853727,0,40.48 GSM1853732,0,66.832 GSM1853749,0,27.36 GSM1853759,0,36.04 GSM1853767,0,1 GSM1853797,0,0 GSM1853803,0,25.23 GSM1853807,0,49.221
| Synonyms | SPARTIN;TAHCCP1 |
| Description | spastic paraplegia 20 (Troyer syndrome) |
|---|---|
| Chromosome | 13q13.3 |
| Database Reference | MIM:607111 HGNC:18514 HPRD:06170 Vega:OTTHUMG00000016730 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE72056 |
| SPG20 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| B-cell | 0 | 0 | 729.255 |
| CAF | 0 | 23.711 | 187.024 |
| Endothelial cell | 0 | 0 | 186.03 |
| Macrophage | 0 | 0 | 269.098 |
| melanoma | 0 | 10.629 | 274.331 |
| melanoma tumor | 0 | 0 | 426.437 |
| T-cell | 0 | 0 | 981.541 |
| unresolved | 0 | 0 | 125.695 |
| Comparing SPG20 expression between groups | FDR |
|---|---|
| B-cell VS CAF | NS |
| B-cell VS Endothelial cell | NS |
| B-cell VS Macrophage | NS |
| B-cell VS T-cell | NS |
| B-cell VS melanoma tumor | NS |
| B-cell VS melanoma | 4.52383365020826e-07 |
| B-cell VS unresolved | NS |
| CAF VS Endothelial cell | NS |
| CAF VS Macrophage | NS |
| CAF VS T-cell | NS |
| CAF VS melanoma tumor | NS |
| CAF VS melanoma | NS |
| CAF VS unresolved | 0.00892398418187232 |
| Endothelial cell VS Macrophage | NS |
| Endothelial cell VS T-cell | NS |
| Endothelial cell VS melanoma tumor | NS |
| Endothelial cell VS melanoma | NS |
| Endothelial cell VS unresolved | NS |
| Macrophage VS T-cell | NS |
| Macrophage VS melanoma tumor | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others B-cell[326]
CAF[39]
Endothelial cell[40]
Macrophage[42]
melanoma[1071]
melanoma tumor[246]
T-cell[1302]
unresolved[96]
