gene,0,0 GSM967508,0,23.855 GSM967509,0,34.266 GSM967510,0,42.634 GSM967511,0,67.995 GSM967512,0,54.036 GSM967513,0,13.123 GSM967514,0,17.981 GSM967515,0,25.17 GSM967516,0,0.014 GSM967517,0,0.047 GSM967518,0,0.038 GSM967519,0,0.027 GSM967520,0,0.014 GSM967521,0,0.036 GSM967535,0,49.726 GSM967536,0,13.288 GSM967537,0,51.132 GSM967538,0,58.461 GSM967539,0,77.759 GSM967540,0,61.212 GSM967541,0,22.148 GSM967542,0,77.257 GSM967543,0,30.473 GSM967544,0,41.939 GSM967545,0,15.72 GSM967546,0,51.212 GSM967547,0,9.821 GSM967548,0,6.39 GSM967549,0,34.396 GSM967550,0,40.672 GSM967551,0,38.533 GSM967552,0,11.294 GSM967553,0,13.324 GSM967554,0,15.079 GSM967555,0,16 GSM967556,0,9.256 GSM967557,0,69.317
| Synonyms | ELF;HEL102;SPTB2;betaSpII |
| Description | spectrin beta, non-erythrocytic 1 |
|---|---|
| Chromosome | 2p21 |
| Database Reference | MIM:182790 HGNC:11275 HPRD:01683 Vega:OTTHUMG00000133746 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SPTBN1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 13.123 | 29.718 | 67.995 |
| LNCaP cell | 0.014 | 0.031 | 0.047 |
| NG2-sorted cell from blood | 13.288 | 54.797 | 77.759 |
| PC3 cell | 22.148 | 36.206 | 77.257 |
| Primary melanocyte | 15.72 | 33.466 | 51.212 |
| SKMEL5 cell | 6.39 | 22.109 | 40.672 |
| T24 cell | 11.294 | 14.202 | 38.533 |
| UACC257 cell | 9.256 | 16 | 69.317 |
| Comparing SPTBN1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 8.78250420893981e-07 |
| LNCaP cell VS PC3 cell | 4.984135257727e-05 |
| LNCaP cell VS Primary melanocyte | 0.00348163492548371 |
| LNCaP cell VS SKMEL5 cell | 0.000171929399861943 |
| LNCaP cell VS T24 cell | 0.000101574259992762 |
| LNCaP cell VS UACC257 cell | 0.00230718738048024 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
