gene,0,0 GSM1833288,0,63.877 GSM1833289,0,64.946 GSM1833290,0,61.313 GSM1833291,0,65.516 GSM1833292,0,49.961 GSM1833294,0,47.38 GSM1833295,0,28.11 GSM1833296,0,24.701 GSM1833297,0,77.664 GSM1833298,0,53.826 GSM1833300,0,6.031 GSM1833302,0,4.528 GSM1833304,0,4.59 GSM1833316,0,1.808 GSM1833318,0,1.493 GSM1833321,0,2.021 GSM1833329,0,0.702 GSM1833330,0,0.368 GSM1833331,0,0.219 GSM1833326,0,0.72 GSM1833327,0,0.375 GSM1833328,0,0.565 GSM1833323,0,2.032 GSM1833324,0,0.467 GSM1833325,0,1.764 GSM1833279,0,76.292 GSM1833280,0,64.793 GSM1833281,0,34.092 GSM1833282,0,46.293 GSM1833307,0,0.732 GSM1833309,0,1.729 GSM1833312,0,6.491 GSM1833314,0,1.463 GSM1985628,0,0 GSM1985629,0,0 GSM1985630,0,0 GSM1985631,0,0 GSM2151860,0,0.054 GSM2151861,0,0.182 GSM2151862,0,0.256 GSM1833332,0,0.698 GSM1833333,0,0.383 GSM1833334,0,0.258 GSM1833283,0,54.417 GSM1833284,0,56.007 GSM1833285,0,66.27 GSM1833286,0,44.954 GSM1833287,0,68.221
| Synonyms | 8B;ARCA1;C6orf98;CPG2;EDMD4;MYNE1;Nesp1;SCAR8;dJ45H2.2 |
| Description | spectrin repeat containing nuclear envelope protein 1 |
|---|---|
| Chromosome | 6q25 |
| Database Reference | MIM:608441 HGNC:17089 HPRD:09762 Vega:OTTHUMG00000015841 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE71318 |
| SYNE1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| human 2 cell | 61.313 | 64.412 | 65.516 |
| human 4 cell | 24.701 | 37.745 | 49.961 |
| human 8 cell | 4.528 | 6.031 | 77.664 |
| human early blastocsyt | 1.493 | 1.808 | 2.021 |
| human ICM | 0.219 | 0.368 | 0.702 |
| human late blastoycst | 0.375 | 0.565 | 0.72 |
| human middle blastocyst | 0.467 | 1.764 | 2.032 |
| human MII oocyte | 34.092 | 55.543 | 76.292 |
| human morula | 0.732 | 1.596 | 6.491 |
| human stem cells | 0 | 0 | 0.256 |
| human TE | 0.258 | 0.383 | 0.698 |
| human zygote | 44.954 | 56.007 | 68.221 |
| Comparing SYNE1 expression between groups | FDR |
|---|---|
| human 2 cell VS human 4 cell | NS |
| human 2 cell VS human 8 cell | NS |
| human 2 cell VS human ICM | 0.0023509225497826 |
| human 2 cell VS human MII oocyte | NS |
| human 2 cell VS human TE | 0.00522811010540255 |
| human 2 cell VS human early blastocsyt | 0.00244361821776968 |
| human 2 cell VS human late blastoycst | 0.00373938658063417 |
| human 2 cell VS human middle blastocyst | 0.00552598694497129 |
| human 2 cell VS human morula | 0.00251237580196276 |
| human 2 cell VS human stem cells | 4.76663596689225e-05 |
| human 2 cell VS human zygote | NS |
| human 4 cell VS human 8 cell | NS |
| human 4 cell VS human ICM | 0.0370412878217567 |
| human 4 cell VS human MII oocyte | NS |
| human 4 cell VS human TE | 0.0372188882688742 |
| human 4 cell VS human early blastocsyt | 0.033639929570278 |
| human 4 cell VS human late blastoycst | 0.0314916677534414 |
| human 4 cell VS human middle blastocyst | 0.0311676078235844 |
| human 4 cell VS human morula | 0.0237967574398801 |
| human 4 cell VS human stem cells | 0.0051887787069245 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others human 2 cell[4]
human 4 cell[4]
human 8 cell[5]
human early blastocsyt[3]
human ICM[3]
human late blastoycst[3]
human middle blastocyst[3]
human MII oocyte[4]
human morula[4]
human stem cells[7]
human TE[3]
human zygote[5]
