gene,0,0 GSM967508,0,35.388 GSM967509,0,126.12 GSM967510,0,236.124 GSM967511,0,600.184 GSM967512,0,537.158 GSM967513,0,136.308 GSM967514,0,1917.936 GSM967515,0,608.563 GSM967516,0,1.86 GSM967517,0,2.34 GSM967518,0,0 GSM967519,0,0.138 GSM967520,0,0.339 GSM967521,0,0.314 GSM967535,0,0.223 GSM967536,0,0.137 GSM967537,0,0 GSM967538,0,0.166 GSM967539,0,0.149 GSM967540,0,0.084 GSM967541,0,0.538 GSM967542,0,32.071 GSM967543,0,0 GSM967544,0,0.098 GSM967545,0,4.362 GSM967546,0,0 GSM967547,0,0.214 GSM967548,0,0.31 GSM967549,0,0.154 GSM967550,0,0.251 GSM967551,0,7444.565 GSM967552,0,497.623 GSM967553,0,6917.083 GSM967554,0,6804.539 GSM967555,0,0.581 GSM967556,0,0.372 GSM967557,0,0.149
| Synonyms | SM22;SMCC;TAGLN1;WS3-10 |
| Description | transgelin |
|---|---|
| Chromosome | 11q23.2 |
| Database Reference | MIM:600818 HGNC:11553 HPRD:02891 Vega:OTTHUMG00000167067 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| TAGLN expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 35.388 | 386.641 | 1,917.936 |
| LNCaP cell | 0 | 0.327 | 2.34 |
| NG2-sorted cell from blood | 0 | 0.143 | 0.223 |
| PC3 cell | 0 | 0.318 | 32.071 |
| Primary melanocyte | 0 | 2.181 | 4.362 |
| SKMEL5 cell | 0.154 | 0.233 | 0.31 |
| T24 cell | 497.623 | 6,860.811 | 7,444.565 |
| UACC257 cell | 0.149 | 0.372 | 0.581 |
| Comparing TAGLN expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.000239153471121783 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.00268326828257502 |
| Embryonic stem cell VS PC3 cell | 0.0218610133171192 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | 0.00828639046592015 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.0259353692639772 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | 0.000279185296360975 |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.0364240359504886 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | 3.57266840009014e-05 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
