gene,0,0 GSM967508,0,15.269 GSM967509,0,168.458 GSM967510,0,139.129 GSM967511,0,232.247 GSM967512,0,38.818 GSM967513,0,255.095 GSM967514,0,202.971 GSM967515,0,49.827 GSM967516,0,0.314 GSM967517,0,0.395 GSM967518,0,0 GSM967519,0,0 GSM967520,0,0.148 GSM967521,0,0.103 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,24.931 GSM967540,0,0 GSM967541,0,0.106 GSM967542,0,6.467 GSM967543,0,0 GSM967544,0,0 GSM967545,0,135.08 GSM967546,0,4.996 GSM967547,0,0 GSM967548,0,5.472 GSM967549,0,0.067 GSM967550,0,6.716 GSM967551,0,788.915 GSM967552,0,361.544 GSM967553,0,851.049 GSM967554,0,562.517 GSM967555,0,23.566 GSM967556,0,33.684 GSM967557,0,12.905
| Synonyms | AMCD1;DA1;DA2B;HEL-S-273;NEM4;TMSB |
| Description | tropomyosin 2 (beta) |
|---|---|
| Chromosome | 9p13 |
| Database Reference | MIM:190990 HGNC:12011 HPRD:11768 Vega:OTTHUMG00000019878 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| TPM2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 15.269 | 153.793 | 255.095 |
| LNCaP cell | 0 | 0.125 | 0.395 |
| NG2-sorted cell from blood | 0 | 0 | 24.931 |
| PC3 cell | 0 | 0.053 | 6.467 |
| Primary melanocyte | 4.996 | 70.038 | 135.08 |
| SKMEL5 cell | 0 | 2.77 | 6.716 |
| T24 cell | 361.544 | 675.716 | 851.049 |
| UACC257 cell | 12.905 | 23.566 | 33.684 |
| Comparing TPM2 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.000389059632905451 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.0235746284086265 |
| Embryonic stem cell VS PC3 cell | 0.00725118196149325 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | 0.00300991598148642 |
| Embryonic stem cell VS T24 cell | 0.0342419701184807 |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | 0.0349761678586214 |
| LNCaP cell VS SKMEL5 cell | 0.0419832533488917 |
| LNCaP cell VS T24 cell | 0.000124290516632436 |
| LNCaP cell VS UACC257 cell | 0.00921881938936147 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
