gene,0,0 GSM967508,0,2010.051 GSM967509,0,3088.047 GSM967510,0,1905.745 GSM967511,0,2703.575 GSM967512,0,2269.861 GSM967513,0,2162.818 GSM967514,0,2479.031 GSM967515,0,1864.575 GSM967516,0,211.311 GSM967517,0,1183.833 GSM967518,0,1549.136 GSM967519,0,786.047 GSM967520,0,1346.458 GSM967521,0,1374.382 GSM967535,0,402.66 GSM967536,0,1113.049 GSM967537,0,812.086 GSM967538,0,661.309 GSM967539,0,371.026 GSM967540,0,1231.21 GSM967541,0,2709.881 GSM967542,0,1162.693 GSM967543,0,3071.337 GSM967544,0,2717.303 GSM967545,0,758.459 GSM967546,0,432.988 GSM967547,0,456.101 GSM967548,0,400.278 GSM967549,0,569.332 GSM967550,0,562.095 GSM967551,0,2167.389 GSM967552,0,694.615 GSM967553,0,2959.875 GSM967554,0,2121.464 GSM967555,0,286.299 GSM967556,0,319.484 GSM967557,0,290.887
| Synonyms | CDCBM6;CSCSC1;M40;OK/SW-cl.56;TUBB1;TUBB5 |
| Description | tubulin beta class I |
|---|---|
| Chromosome | 6p21.33 |
| Database Reference | MIM:191130 HGNC:20778 Vega:OTTHUMG00000031059 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| TUBB expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 1,864.575 | 2,216.339 | 3,088.047 |
| LNCaP cell | 211.311 | 1,265.145 | 1,549.136 |
| NG2-sorted cell from blood | 371.026 | 736.697 | 1,231.21 |
| PC3 cell | 1,162.693 | 2,713.592 | 3,071.337 |
| Primary melanocyte | 432.988 | 595.723 | 758.459 |
| SKMEL5 cell | 400.278 | 509.098 | 569.332 |
| T24 cell | 694.615 | 2,144.427 | 2,959.875 |
| UACC257 cell | 286.299 | 290.887 | 319.484 |
| Comparing TUBB expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.0137217716386566 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.00272171425119137 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.0113771993452075 |
| Embryonic stem cell VS SKMEL5 cell | 8.73800629906229e-05 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.00012840054355106 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.0171221369902279 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
