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Gene View

General Information

USP3[ENSG00000140455]

SynonymsSIH003;UBP
Descriptionubiquitin specific peptidase 3
Chromosome15q22.3
Database ReferenceMIM:604728 HGNC:12626 HPRD:05290 Vega:OTTHUMG00000172309 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Created with Highcharts 4.2.5RankRank of USP3 Expression in GSE75140fetal human cortex 2[13 weeks post-conception]fetal human cortex 1[12 weeks post-conception]iPSC 409B2[58 days]ESC H9[53 days]iPSC 409B2[35 days]iPSC 409B2[33 days]iPSC 409B2[65 days]iPSC 409B2[37 days]iPSC 409B2[41 days]0102030405060708090100

Gene Expression

Created with Highcharts 4.2.5

 

Displaying 1-9 of 9 results.
USP3 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]0287.8971,472.711
fetal human cortex 1[12 weeks post-conception]0444.976926.056
fetal human cortex 2[13 weeks post-conception]0420.2251,070.508
iPSC 409B2[33 days]0258.343666.74
iPSC 409B2[35 days]0257.871547.817
iPSC 409B2[37 days]0232.72407.584
iPSC 409B2[41 days]0206.682511.98
iPSC 409B2[58 days]0322.6899.123
iPSC 409B2[65 days]0217.494670.93
Created with Highcharts 4.2.5Cell GroupGene Expression Level (TPM)USP3 Expression in Each Cell GroupESC H9[53 days]fetal human cortex1[12 weeks post-conception]fetal human cortex 1[12 weeks post-conception]fetal human cortex2[13 weeks post-conception]fetal human cortex 2[13 weeks post-conception]iPSC 409B2[33 days]iPSC 409B2[35 days]iPSC 409B2[37 days]iPSC 409B2[41 days]iPSC 409B2[58 days]iPSC 409B2[65 days]050010001500-5002000
Displaying 1-20 of 36 results.
Comparing USP3 expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]0.0268484207708454
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]NS
ESC H9[53 days] VS iPSC 409B2[33 days]NS
ESC H9[53 days] VS iPSC 409B2[35 days]NS
ESC H9[53 days] VS iPSC 409B2[37 days]NS
ESC H9[53 days] VS iPSC 409B2[41 days]0.0238561475121518
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]0.00560740999743905
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]0.000319768194469325
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]6.48073959221543e-09
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]6.47967211525684e-10
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]0.0464400423646177
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]0.000198901177498017
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]0.00703270767949813
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]0.000319606739505664
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]3.54458793933504e-07
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]1.58656271797484e-06
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]NS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for USP3

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]