scRNASeqDB - GeneView Site

Gene View

gene,0,0
GSM1677652,0,0.884
GSM1677653,0,0
GSM1677654,0,0
GSM1677655,0,0
GSM1677656,0,0
GSM1677657,0,0
GSM1677658,0,0
GSM1677659,0,52.55
GSM1677660,0,0
GSM1677661,0,0
GSM1677662,0,0
GSM1677663,0,0
GSM1677664,0,0
GSM1677665,0,0
GSM1677666,0,0
GSM1677667,0,0
GSM1677668,0,0
GSM1677669,0,0
GSM1677670,0,0
GSM1677671,0,0
GSM1677672,0,0
GSM1677673,0,0
GSM1677674,0,0
GSM1677675,0,7.465
GSM1677676,0,0.363
GSM1677677,0,0
GSM1677678,0,0
GSM1677679,0,0
GSM1677680,0,6.986
GSM1677681,0,7.817
GSM1677682,0,2.518
GSM1677683,0,0
GSM1677684,0,0
GSM1677685,0,0
GSM1677686,0,0
GSM1677687,0,0
GSM1677688,0,0
GSM1677689,0,0
GSM1677690,0,287.982
GSM1677691,0,30.119
GSM1677692,0,0
GSM1677693,0,0
GSM1677694,0,15.575
GSM1677695,0,0
GSM1677696,0,6.87
GSM1677697,0,0
GSM1677698,0,0
GSM1677699,0,0
GSM1677700,0,0
GSM1677701,0,0
GSM1677702,0,0
GSM1677703,0,0
GSM1677704,0,0
GSM1677705,0,11.45
GSM1677622,0,0
GSM1677623,0,0
GSM1677624,0,0.157
GSM1677625,0,0
GSM1677626,0,0
GSM1677627,0,0
GSM1677628,0,0
GSM1677629,0,0.071
GSM1677630,0,0
GSM1677631,0,0
GSM1677632,0,0
GSM1677633,0,0
GSM1677634,0,0
GSM1677635,0,0
GSM1677636,0,0
GSM1677637,0,0
GSM1677638,0,0
GSM1677639,0,0.207
GSM1677640,0,0
GSM1677641,0,0
GSM1677642,0,0
GSM1677643,0,0
GSM1677644,0,0
GSM1677645,0,0
GSM1677646,0,0
GSM1677647,0,0
GSM1677648,0,0
GSM1677649,0,0
GSM1677650,0,0
GSM1677651,0,0
GSM1677792,0,0
GSM1677793,0,0
GSM1677794,0,0
GSM1677795,0,0
GSM1677796,0,0
GSM1677797,0,0
GSM1677798,0,0
GSM1677799,0,0
GSM1677800,0,0
GSM1677519,0,0
GSM1677520,0,0
GSM1677521,0,0
GSM1677522,0,0
GSM1677523,0,0
GSM1677524,0,0
GSM1677525,0,0
GSM1677526,0,0
GSM1677527,0,0
GSM1677528,0,0
GSM1677529,0,0
GSM1677530,0,0
GSM1677531,0,0
GSM1677532,0,0
GSM1677533,0,0
GSM1677534,0,0
GSM1677535,0,0
GSM1677536,0,0
GSM1677537,0,0
GSM1677538,0,0
GSM1677539,0,0
GSM1677540,0,0
GSM1677541,0,0
GSM1677542,0,0.193
GSM1677543,0,0
GSM1677544,0,0
GSM1677545,0,0
GSM1677546,0,0
GSM1677547,0,0
GSM1677548,0,3.585
GSM1677549,0,0
GSM1677550,0,0
GSM1677551,0,0
GSM1677552,0,0
GSM1677553,0,0
GSM1677554,0,0
GSM1677555,0,0
GSM1677556,0,0
GSM1677557,0,0
GSM1677558,0,0
GSM1677559,0,0
GSM1677560,0,0
GSM1677561,0,0
GSM1677562,0,0
GSM1677563,0,0
GSM1677564,0,0
GSM1677565,0,0
GSM1677566,0,0
GSM1677567,0,0
GSM1677568,0,0
GSM1677569,0,0
GSM1677570,0,17.822
GSM1677571,0,0
GSM1677572,0,0
GSM1677573,0,0
GSM1677574,0,0
GSM1677575,0,48.224
GSM1677576,0,0
GSM1677577,0,0
GSM1677578,0,0
GSM1677579,0,0
GSM1677580,0,0
GSM1677581,0,0
GSM1677582,0,0.642
GSM1677583,0,0
GSM1677584,0,0
GSM1677585,0,0
GSM1677586,0,0
GSM1677587,0,0
GSM1677588,0,0
GSM1677589,0,0
GSM1677590,0,0
GSM1677591,0,0
GSM1677592,0,0.336
GSM1677593,0,0.196
GSM1677594,0,0
GSM1677595,0,45.286
GSM1677596,0,0
GSM1677597,0,10.27
GSM1677598,0,0
GSM1677599,0,0
GSM1677600,0,0
GSM1677601,0,0
GSM1677602,0,0
GSM1677603,0,20.969
GSM1677604,0,0
GSM1677605,0,0
GSM1677606,0,0
GSM1677607,0,0
GSM1677608,0,0
GSM1677609,0,0
GSM1677610,0,0
GSM1677611,0,3.524
GSM1677612,0,0
GSM1677613,0,0
GSM1677614,0,0
GSM1677615,0,0
GSM1677616,0,0
GSM1677617,0,92.6
GSM1677618,0,0
GSM1677619,0,2.588
GSM1677620,0,0
GSM1677621,0,0
GSM1677473,0,0
GSM1677474,0,0
GSM1677475,0,0
GSM1677476,0,0.686
GSM1677477,0,73.351
GSM1677478,0,0
GSM1677479,0,0
GSM1677480,0,0
GSM1677481,0,0
GSM1677482,0,0
GSM1677483,0,0
GSM1677484,0,0
GSM1677485,0,0
GSM1677486,0,0
GSM1677487,0,0
GSM1677488,0,0
GSM1677489,0,0
GSM1677490,0,0
GSM1677491,0,0
GSM1677492,0,0
GSM1677493,0,0
GSM1677494,0,0
GSM1677495,0,2.17
GSM1677496,0,0
GSM1677497,0,0
GSM1677498,0,0.216
GSM1677499,0,0
GSM1677500,0,0
GSM1677501,0,0
GSM1677502,0,0
GSM1677503,0,1.327
GSM1677504,0,0
GSM1677505,0,0
GSM1677506,0,0.59
GSM1677507,0,0.212
GSM1677508,0,0
GSM1677509,0,0
GSM1677510,0,20.561
GSM1677511,0,0
GSM1677512,0,0
GSM1677513,0,65.464
GSM1677514,0,0
GSM1677515,0,0
GSM1677516,0,0
GSM1677517,0,0
GSM1677518,0,0
GSM1677770,0,0
GSM1677771,0,0
GSM1677772,0,0
GSM1677773,0,0
GSM1677774,0,0.215
GSM1677775,0,0
GSM1677776,0,0
GSM1677777,0,208.978
GSM1677778,0,0
GSM1677779,0,0
GSM1677780,0,0
GSM1677781,0,0
GSM1677782,0,50.403
GSM1677783,0,0
GSM1677784,0,0
GSM1677785,0,0
GSM1677786,0,0
GSM1677787,0,0.208
GSM1677788,0,0
GSM1677789,0,0
GSM1677790,0,0
GSM1677791,0,0
GSM1677754,0,109.465
GSM1677755,0,158.577
GSM1677756,0,346.639
GSM1677757,0,15.256
GSM1677758,0,0
GSM1677759,0,24.537
GSM1677760,0,0
GSM1677761,0,432.735
GSM1677762,0,600.613
GSM1677763,0,318.875
GSM1677764,0,0
GSM1677765,0,81.388
GSM1677766,0,53.294
GSM1677767,0,0
GSM1677768,0,0.231
GSM1677769,0,0.65
GSM1677732,0,0.411
GSM1677733,0,0
GSM1677734,0,0.267
GSM1677735,0,238.887
GSM1677736,0,231.798
GSM1677737,0,108.01
GSM1677738,0,342.469
GSM1677739,0,298.786
GSM1677740,0,430.747
GSM1677741,0,27.448
GSM1677742,0,431.392
GSM1677743,0,0
GSM1677744,0,0
GSM1677745,0,62.223
GSM1677746,0,95.601
GSM1677747,0,156.655
GSM1677748,0,0
GSM1677749,0,213.467
GSM1677750,0,0
GSM1677751,0,0.231
GSM1677752,0,453.288
GSM1677753,0,0
GSM1677706,0,1.734
GSM1677707,0,0
GSM1677708,0,877.155
GSM1677709,0,696.701
GSM1677710,0,1341.406
GSM1677711,0,514.471
GSM1677712,0,293.702
GSM1677713,0,1198.091
GSM1677714,0,440.334
GSM1677715,0,1047.867
GSM1677716,0,925.986
GSM1677717,0,1530.603
GSM1677718,0,0.542
GSM1677719,0,2445.454
GSM1677720,0,718.374
GSM1677721,0,383.585
GSM1677722,0,0
GSM1677723,0,2528.395
GSM1677724,0,1160.51
GSM1677725,0,635.333
GSM1677726,0,1575.427
GSM1677727,0,3124.971
GSM1677728,0,0
GSM1677729,0,583.755
GSM1677730,0,869.254
GSM1677731,0,363.5

VCAN[ENSG00000038427]

Synonyms	CSPG2;ERVR;GHAP;PG-M;WGN;WGN1
Description	versican
Chromosome	5q14.3
Database Reference	MIM:118661 HGNC:2464 HPRD:00340 Vega:OTTHUMG00000131321
See related	THE HUMAN PROTEIN ATLAS
Dataset	GSE63818

Displaying 1-19 of 19 results.

VCAN expression in each cell group	Median Value (TPM)	Maximum Value (TPM)
Primordial Germ Cells[female 10 week gestation]	0	52.55
Primordial Germ Cells[female 11 week gestation]	0	0
Primordial Germ Cells[female 17 week gestation]	0	287.982
Primordial Germ Cells[female 4 week gestation]	0	0.157
Primordial Germ Cells[female 8 week gestation]	0	0.207
Primordial Germ Cells[male 10 week gestation]	0	0
Primordial Germ Cells[male 11 week gestation]	0	3.585
Primordial Germ Cells[male 19 week gestation]	0	92.6
Primordial Germ Cells[male 4 week gestation]	0	73.351
Primordial Germ Cells[male 7 week gestation]	0	65.464
Somatic Cells[female 10 week gestation]	0	0
Somatic Cells[female 11 week gestation]	0	208.978
Somatic Cells[female 17 week gestation]	0	0.208
Somatic Cells[female 4 week gestation]	67.001	346.639
Somatic Cells[female 8 week gestation]	26.972	600.613
Somatic Cells[male 10 week gestation]	231.798	431.392
Somatic Cells[male 11 week gestation]	31.112	213.467
Somatic Cells[male 19 week gestation]	0.231	453.288
Somatic Cells[male 7 week gestation]	707.537	3,124.971

Displaying 161-171 of 171 results.

Comparing VCAN expression between groups	FDR
Somatic Cells[female 4 week gestation] VS Somatic Cells[male 7 week gestation]	0.00456580216411181
Somatic Cells[female 8 week gestation] VS Somatic Cells[male 10 week gestation]	NS
Somatic Cells[female 8 week gestation] VS Somatic Cells[male 11 week gestation]	NS
Somatic Cells[female 8 week gestation] VS Somatic Cells[male 19 week gestation]	NS
Somatic Cells[female 8 week gestation] VS Somatic Cells[male 7 week gestation]	0.00594853208843143
Somatic Cells[male 10 week gestation] VS Somatic Cells[male 11 week gestation]	NS
Somatic Cells[male 10 week gestation] VS Somatic Cells[male 19 week gestation]	NS
Somatic Cells[male 10 week gestation] VS Somatic Cells[male 7 week gestation]	0.00241957712201764
Somatic Cells[male 11 week gestation] VS Somatic Cells[male 19 week gestation]	NS
Somatic Cells[male 11 week gestation] VS Somatic Cells[male 7 week gestation]	9.45033100123413e-05
Somatic Cells[male 19 week gestation] VS Somatic Cells[male 7 week gestation]	NS

NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others

Primordial Germ Cells[female 10 week gestation][13]
Primordial Germ Cells[female 11 week gestation][10]
Primordial Germ Cells[female 17 week gestation][31]
Primordial Germ Cells[female 4 week gestation][12]
Primordial Germ Cells[female 8 week gestation][27]
Primordial Germ Cells[male 10 week gestation][19]
Primordial Germ Cells[male 11 week gestation][27]
Primordial Germ Cells[male 19 week gestation][57]
Primordial Germ Cells[male 4 week gestation][6]
Primordial Germ Cells[male 7 week gestation][40]
Somatic Cells[female 10 week gestation][3]
Somatic Cells[female 11 week gestation][10]
Somatic Cells[female 17 week gestation][9]
Somatic Cells[female 4 week gestation][6]
Somatic Cells[female 8 week gestation][10]
Somatic Cells[male 10 week gestation][11]
Somatic Cells[male 11 week gestation][8]
Somatic Cells[male 19 week gestation][3]
Somatic Cells[male 7 week gestation][26]

Gene View

General Information

VCAN[ENSG00000038427]

Gene Rank

Gene Expression

Top 100 positive and negative correlated genes for VCAN