Gene View

General Information

VCAN[ENSG00000038427]

SynonymsCSPG2;ERVR;GHAP;PG-M;WGN;WGN1
Descriptionversican
Chromosome5q14.3
Database ReferenceMIM:118661 HGNC:2464 HPRD:00340 Vega:OTTHUMG00000131321 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE57872

Gene Rank

Created with Highcharts 4.2.5RankRank of VCAN Expression in GSE57872glioblastoma [Pro+Neu]glioblastoma [Pro]glioblastoma [Neu]glioblastoma [None]glioblastoma [Cla]glioblastoma [Pro+Cla]glioblastoma [Neu+Mes]glioblastoma [Mes]glioblastoma [Neu+Cla]glioblastoma [Cla+Mes]05101520253035404550556065707580859095100

Gene Expression

Created with Highcharts 4.2.5

 

Displaying 1-10 of 10 results.
VCAN expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
glioblastoma [Cla]0177.3391,789.247
glioblastoma [Cla+Mes]01.497181.079
glioblastoma [Mes]033.1636,718.295
glioblastoma [Neu]0385.1561,637.987
glioblastoma [Neu+Cla]035.50771.014
glioblastoma [Neu+Mes]0139.6582,051.243
glioblastoma [None]0175.2742,832.493
glioblastoma [Pro]0469.743,789.093
glioblastoma [Pro+Cla]077.5161,054.236
glioblastoma [Pro+Neu]364.981543.4951,471.59
Created with Highcharts 4.2.5Cell GroupGene Expression Level (TPM)VCAN Expression in Each Cell Groupglioblastoma [Cla]glioblastoma[Cla+Mes]glioblastoma [Cla+Mes]glioblastoma [Mes]glioblastoma [Neu]glioblastoma[Neu+Cla]glioblastoma [Neu+Cla]glioblastoma[Neu+Mes]glioblastoma [Neu+Mes]glioblastoma[None]glioblastoma [None]glioblastoma [Pro]glioblastoma[Pro+Cla]glioblastoma [Pro+Cla]glioblastoma[Pro+Neu]glioblastoma [Pro+Neu]-2k0k2k4k6k8k
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for VCAN

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others