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General Information

VCAN[ENSG00000038427]

SynonymsCSPG2;ERVR;GHAP;PG-M;WGN;WGN1
Descriptionversican
Chromosome5q14.3
Database ReferenceMIM:118661 HGNC:2464 HPRD:00340 Vega:OTTHUMG00000131321 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
VCAN expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]0360.8891,596.035
fetal human cortex 1[12 weeks post-conception]001,050.038
fetal human cortex 2[13 weeks post-conception]00815.44
iPSC 409B2[33 days]0234.919535.205
iPSC 409B2[35 days]0221.077424.946
iPSC 409B2[37 days]0247.392891.547
iPSC 409B2[41 days]0347.062773.412
iPSC 409B2[58 days]0277.731,022.187
iPSC 409B2[65 days]0290.811650.515
Displaying 1-20 of 36 results.
Comparing VCAN expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]0.000292898155361555
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]0.00168283455646043
ESC H9[53 days] VS iPSC 409B2[33 days]0.00386563560757766
ESC H9[53 days] VS iPSC 409B2[35 days]2.46618018042286e-06
ESC H9[53 days] VS iPSC 409B2[37 days]0.000375704673506127
ESC H9[53 days] VS iPSC 409B2[41 days]NS
ESC H9[53 days] VS iPSC 409B2[58 days]0.0441042556517077
ESC H9[53 days] VS iPSC 409B2[65 days]0.037372847578998
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]0.028746761176526
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]0.032936236998012
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]NS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for VCAN

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]