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GSM1853400,0,499.249 GSM1853401,0,41.099 GSM1853403,0,915.589 GSM1853404,0,348.102 GSM1853405,0,0 GSM1853414,0,3828.769 GSM1853417,0,0 GSM1853419,0,1130.482 GSM1853420,0,35.539 GSM1853425,0,0 GSM1853426,0,1316.977 GSM1853427,0,5213.236 GSM1853428,0,977.768 GSM1853429,0,2066.342 GSM1853431,0,649.865 GSM1853432,0,454.208 GSM1853433,0,900.382 GSM1853436,0,0 GSM1853437,0,0 GSM1853439,0,611.551 GSM1853442,0,4183.468 GSM1853444,0,236.583 GSM1853446,0,2494.19 GSM1853450,0,0 GSM1853453,0,11.61 GSM1853457,0,2111.44 GSM1853458,0,0 GSM1853461,0,1288.228 GSM1853464,0,460.59 GSM1853469,0,894.72 GSM1853473,0,2376.909 GSM1853474,0,0 GSM1853476,0,1253.691 GSM1853477,0,36.541 GSM1853480,0,3285.835 GSM1853483,0,63.922 GSM1853491,0,0 GSM1853492,0,842.247 GSM1853493,0,0 GSM1853494,0,262.125 GSM1853497,0,0 GSM1853501,0,949.426 GSM1853503,0,1445.529 GSM1853504,0,0 GSM1853506,0,3244.067 GSM1853507,0,976.536 GSM1853510,0,242.989 GSM1853515,0,2039.176 GSM1853516,0,0 GSM1853519,0,117.498 GSM1853520,0,1983.832 GSM1853521,0,181.066 GSM1853523,0,1085.01 GSM1853524,0,1063.739 GSM1853525,0,376.635 GSM1853526,0,876.224 GSM1853530,0,0 GSM1853543,0,1155.657 GSM1853546,0,53.749 GSM1853550,0,356.54 GSM1853554,0,1996.448 GSM1853559,0,1597.639 GSM1853569,0,1576.496 GSM1853574,0,2951.122 GSM1853585,0,0 GSM1853588,0,894.031 GSM1853590,0,1882.829 GSM1853592,0,0 GSM1853604,0,1687.773 GSM1853608,0,0 GSM1853611,0,703.133 GSM1853612,0,27.709 GSM1853614,0,0 GSM1853615,0,648.495 GSM1853620,0,609.916 GSM1853622,0,3617.671 GSM1853623,0,0 GSM1853628,0,99.359 GSM1853631,0,642.452 GSM1853633,0,1098.296 GSM1853634,0,649.865 GSM1853635,0,849.961 GSM1853638,0,1352.111 GSM1853639,0,599.055 GSM1853642,0,45.109 GSM1853643,0,2779.765 GSM1853645,0,557.402 GSM1853646,0,913.666 GSM1853647,0,1673.944 GSM1853651,0,1722.726 GSM1853654,0,0 GSM1853655,0,0 GSM1853657,0,1475.392 GSM1853660,0,1196.932 GSM1853662,0,96.753 GSM1853668,0,1369.977 GSM1853673,0,0 GSM1853674,0,1126.694 GSM1853685,0,1613.203 GSM1853687,0,600.873 GSM1853688,0,808.721 GSM1853690,0,3401.116 GSM1850626,0,2652.8 GSM1850630,0,1253.078 GSM1850664,0,9132.849 GSM1850763,0,13159.638 GSM1850820,0,1722.726 GSM1850829,0,4433.954 GSM1850915,0,4987.629 GSM1851284,0,5830.71 GSM1851347,0,0 GSM1851355,0,1223.146 GSM1851360,0,5890.118 GSM1851383,0,2324.063 GSM1851474,0,1011.468 GSM1851515,0,4599.607 GSM1851539,0,0 GSM1851567,0,801.827 GSM1851588,0,759.047 GSM1851592,0,1474.054 GSM1851603,0,489.426 GSM1851614,0,3746.642 GSM1851627,0,852.768 GSM1851715,0,1660.69 GSM1851743,0,2864.964 GSM1851774,0,7345.604 GSM1851778,0,0 GSM1851842,0,4182.887 GSM1851844,0,1123.704 GSM1851848,0,8853.914 GSM1851858,0,2943.537 GSM1851874,0,574.204 GSM1851903,0,696.393 GSM1851913,0,957.373 GSM1851989,0,1391.473 GSM1852002,0,17199.626 GSM1852018,0,2973.165 GSM1852031,0,1737.32 GSM1852077,0,666.585 GSM1852134,0,290.877 GSM1852144,0,9602.048 GSM1852348,0,8496.371 GSM1852363,0,2010.824 GSM1852454,0,3433.185 GSM1852477,0,1173.897 GSM1852562,0,9087.334 GSM1852663,0,1251.853 GSM1852708,0,392.579 GSM1852712,0,1863.64 GSM1852713,0,3836.493 GSM1852735,0,1678.736 GSM1852744,0,1503.873 GSM1852752,0,2737.356 GSM1852757,0,604.951 GSM1852779,0,1580.68 GSM1852781,0,2714.788 GSM1852792,0,5256.132 GSM1852832,0,1621.664 GSM1852935,0,3620.187 GSM1852936,0,773.793 GSM1852941,0,1032.281 GSM1852991,0,1992.558 GSM1853006,0,6203.662 GSM1853011,0,6093.53 GSM1853035,0,5076.396 GSM1853080,0,211.264 GSM1853085,0,10791.381 GSM1853138,0,5144.898 GSM1853148,0,2397.18 GSM1853166,0,4587.8 GSM1853167,0,15034.287 GSM1853198,0,1114.079 GSM1853211,0,7095.538 GSM1853234,0,2305.693 GSM1853270,0,3449.692 GSM1853289,0,3453.291 GSM1853378,0,274.962 GSM1853406,0,8126.7 GSM1853408,0,11958.279 GSM1853500,0,3423.176 GSM1853522,0,9965.186 GSM1853649,0,1549.565 GSM1853678,0,7072.918 GSM1853681,0,480.983 GSM1853691,0,12518.518 GSM1853692,0,10664.849 GSM1853703,0,4076.438 GSM1853709,0,6591.271 GSM1853719,0,2530.907 GSM1853724,0,5753.894 GSM1853727,0,4659.745 GSM1853732,0,2335.416 GSM1853749,0,898.995 GSM1853759,0,7077.829 GSM1853767,0,5220.119 GSM1853797,0,5414.702 GSM1853803,0,10078.528 GSM1853807,0,4424.722
| Synonyms | CTRCT30;HEL113 |
| Description | vimentin |
|---|---|
| Chromosome | 10p13 |
| Database Reference | MIM:193060 HGNC:12692 HPRD:01899 Vega:OTTHUMG00000017744 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE72056 |
| VIM expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| B-cell | 0 | 42.065 | 3,006.643 |
| CAF | 1,279.976 | 5,174.281 | 14,663.527 |
| Endothelial cell | 1,767 | 5,424.534 | 16,091.73 |
| Macrophage | 0 | 2,489.941 | 6,628.438 |
| melanoma | 204.782 | 4,139.806 | 39,227.027 |
| melanoma tumor | 0 | 695.463 | 14,351.592 |
| T-cell | 0 | 549.242 | 8,503.45 |
| unresolved | 0 | 2,801.16 | 17,199.626 |
| Comparing VIM expression between groups | FDR |
|---|---|
| B-cell VS CAF | 2.34665762439359e-21 |
| B-cell VS Endothelial cell | 9.08693776703349e-21 |
| B-cell VS Macrophage | 2.00328322025316e-11 |
| B-cell VS T-cell | 4.0729109934468e-21 |
| B-cell VS melanoma tumor | 1.13989573475232e-17 |
| B-cell VS melanoma | 5.57464155333817e-224 |
| B-cell VS unresolved | 3.0037955559582e-33 |
| CAF VS Endothelial cell | NS |
| CAF VS Macrophage | 8.24688935635492e-06 |
| CAF VS T-cell | 2.12678840963428e-17 |
| CAF VS melanoma tumor | 4.2217848540045e-07 |
| CAF VS melanoma | NS |
| CAF VS unresolved | NS |
| Endothelial cell VS Macrophage | 2.03817605715579e-05 |
| Endothelial cell VS T-cell | 2.08367329337427e-16 |
| Endothelial cell VS melanoma tumor | 1.54844081810391e-06 |
| Endothelial cell VS melanoma | NS |
| Endothelial cell VS unresolved | NS |
| Macrophage VS T-cell | 6.50737468201396e-06 |
| Macrophage VS melanoma tumor | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others B-cell[326]
CAF[39]
Endothelial cell[40]
Macrophage[42]
melanoma[1071]
melanoma tumor[246]
T-cell[1302]
unresolved[96]
