gene,0,0 GSM967508,0,0 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0 GSM967515,0,0.046 GSM967516,0,0 GSM967517,0,0 GSM967518,0,0.043 GSM967519,0,0.054 GSM967520,0,0 GSM967521,0,0.041 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0 GSM967540,0,0.033 GSM967541,0,0 GSM967542,0,0.043 GSM967543,0,0.038 GSM967544,0,0.038 GSM967545,0,0 GSM967546,0,0 GSM967547,0,0 GSM967548,0,0.03 GSM967549,0,0 GSM967550,0,0 GSM967551,0,0.031 GSM967552,0,0 GSM967553,0,0 GSM967554,0,0 GSM967555,0,0 GSM967556,0,0 GSM967557,0,0
| Synonyms | CHX10;HOX10;MCOP2;MCOPCB3;RET1 |
| Description | visual system homeobox 2 |
|---|---|
| Chromosome | 14q24.3 |
| Database Reference | MIM:142993 HGNC:1975 HPRD:08852 Vega:OTTHUMG00000171206 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| VSX2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.046 |
| LNCaP cell | 0 | 0.02 | 0.054 |
| NG2-sorted cell from blood | 0 | 0 | 0.033 |
| PC3 cell | 0 | 0.038 | 0.043 |
| Primary melanocyte | 0 | 0 | 0 |
| SKMEL5 cell | 0 | 0 | 0.03 |
| T24 cell | 0 | 0 | 0.031 |
| UACC257 cell | 0 | 0 | 0 |
| Comparing VSX2 expression between groups | FDR |
|---|---|
| PC3 cell VS T24 cell | NS |
| PC3 cell VS UACC257 cell | NS |
| Primary melanocyte VS SKMEL5 cell | NS |
| Primary melanocyte VS T24 cell | NS |
| Primary melanocyte VS UACC257 cell | NS |
| SKMEL5 cell VS T24 cell | NS |
| SKMEL5 cell VS UACC257 cell | NS |
| T24 cell VS UACC257 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
