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  CAF

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in CAF

Displaying 11-20 of 39 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1851831Illumina NextSeq 500Homo sapienscy82-CD45-pos-1-D06-S522-combCAF
GSE72056GSM1852350Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-D07-S331-combCAF
GSE72056GSM1853381Illumina NextSeq 500Homo sapienscy80_CD_90_pos_E04_S916_combCAF
GSE72056GSM1853671Illumina NextSeq 500Homo sapienscy80_CD_90_pos_A02_S866_combCAF
GSE72056GSM1853395Illumina NextSeq 500Homo sapienscy80_CD_90_pos_E09_S921_combCAF
GSE72056GSM1853399Illumina NextSeq 500Homo sapienscy80_CD_90_pos_D10_S910_combCAF
GSE72056GSM1850587Illumina NextSeq 500Homo sapiensCy80_II_CD45_G05_S941_combCAF
GSE72056GSM1853413Illumina NextSeq 500Homo sapienscy80_CD_90_pos_B04_S880_combCAF
GSE72056GSM1851641Illumina NextSeq 500Homo sapienscy80-CD45-neg-D12-S912-combCAF
GSE72056GSM1852665Illumina NextSeq 500Homo sapienscy79-p3-CD45-neg-PDL1-neg-E09-S249-combCAF

Gene rank in CAF

Displaying 21-30 of 22503 results.
Rank orderGene SymbolEnsembl ID
21TIMP1ENSG00000102265
22RPL3ENSG00000100316
23TPT1ENSG00000133112
24RPLP0ENSG00000089157
25LGALS1ENSG00000100097
26RPS6ENSG00000137154
27RPL7ENSG00000147604
28RPL19ENSG00000108298
29RPS27ENSG00000177954
30RPS8ENSG00000142937