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Cell Information

  CAF

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in CAF

Displaying 1-10 of 39 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1852453Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-B04-S304-combCAF
GSE72056GSM1852253Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-C01-S313-combCAF
GSE72056GSM1852350Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-D07-S331-combCAF
GSE72056GSM1852420Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-F09-S357-combCAF
GSE72056GSM1852778Illumina NextSeq 500Homo sapiensCy59_16CAF
GSE72056GSM1852780Illumina NextSeq 500Homo sapiensCy59_18CAF
GSE72056GSM1852790Illumina NextSeq 500Homo sapiensCy59_2CAF
GSE72056GSM1852805Illumina NextSeq 500Homo sapiensCy59_52CAF
GSE72056GSM1852808Illumina NextSeq 500Homo sapiensCy59_55CAF
GSE72056GSM1852828Illumina NextSeq 500Homo sapiensCy59_7CAF

Gene rank in CAF

Displaying 11-20 of 22503 results.
Rank orderGene SymbolEnsembl ID
11B2MENSG00000166710
12ACTG1ENSG00000184009
13FTH1ENSG00000167996
14RPLP1ENSG00000137818
15TMSB10ENSG00000034510
16GAPDHENSG00000111640
17COL1A2ENSG00000164692
18ANXA2ENSG00000182718
19COL1A1ENSG00000108821
20RPS4XENSG00000198034