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  CAF

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in CAF

Displaying 11-20 of 39 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1852453Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-B04-S304-combCAF
GSE72056GSM1852508Illumina NextSeq 500Homo sapienscy82-CD45-neg-3-C08-S800-combCAF
GSE72056GSM1852665Illumina NextSeq 500Homo sapienscy79-p3-CD45-neg-PDL1-neg-E09-S249-combCAF
GSE72056GSM1852778Illumina NextSeq 500Homo sapiensCy59_16CAF
GSE72056GSM1852780Illumina NextSeq 500Homo sapiensCy59_18CAF
GSE72056GSM1852790Illumina NextSeq 500Homo sapiensCy59_2CAF
GSE72056GSM1852805Illumina NextSeq 500Homo sapiensCy59_52CAF
GSE72056GSM1852808Illumina NextSeq 500Homo sapiensCy59_55CAF
GSE72056GSM1852828Illumina NextSeq 500Homo sapiensCy59_7CAF
GSE72056GSM1852842Illumina NextSeq 500Homo sapiensCy59_95CAF

Gene rank in CAF

Displaying 1-10 of 22503 results.
Rank orderGene SymbolEnsembl ID
1MTRNR2L2ENSG00000271043
2MTRNR2L8ENSG00000255823
3ACTBENSG00000075624
4TMSB4XENSG00000205542
5FTLENSG00000087086
6RPL41ENSG00000229117
7MTRNR2L1ENSG00000256618
8VIMENSG00000026025
9EEF1A1ENSG00000156508
10RPS18ENSG00000096150