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  Cerebral Cortex GW19.5

Overall Design16 Bulk Tissue Samples from GW13-23; 226 Single Cells from GW19.5-23.5
SummaryLong non-coding RNAs (lncRNAs) comprise a diverse class of transcripts that can regulate molecular and cellular processes in brain development and diseasee. LncRNAs exhibit cell type- and tissue-specific expression, but little is known about the expression and function of lncRNAs in the developing human brain. Here, we deeply profiled lncRNAs from polyadenylated and total RNA obtained from human neocortex at different stages of development and integrated this resource to analyze the transcriptomes of single cells. While lncRNAs were generally detected at low levels in whole tissues, single cell transcriptomics revealed that many lncRNAs are abundantly expressed in individual cells and are cell type-specific. Furthermore, we used CRISRPi to show that LOC646329, a lncRNA enriched in radial glia but detected at low abundance in tissues, regulates cell proliferation. The discrete and abundant expression of lncRNAs among individual cells has important implications for both their biological function and utility for distinguishing neural cell types.
Dataset viewGSE71315

Samples in Cerebral Cortex GW19.5

Displaying 1-10 of 26 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE71315GSM1832483Illumina HiSeq 2500Homo sapiensS44.A10Cerebral Cortex GW19.5
GSE71315GSM1832484Illumina HiSeq 2500Homo sapiensS44.A11Cerebral Cortex GW19.5
GSE71315GSM1832485Illumina HiSeq 2500Homo sapiensS44.A6Cerebral Cortex GW19.5
GSE71315GSM1832486Illumina HiSeq 2500Homo sapiensS44.A8Cerebral Cortex GW19.5
GSE71315GSM1832487Illumina HiSeq 2500Homo sapiensS44.A9Cerebral Cortex GW19.5
GSE71315GSM1832488Illumina HiSeq 2500Homo sapiensS44.B6Cerebral Cortex GW19.5
GSE71315GSM1832489Illumina HiSeq 2500Homo sapiensS44.B7Cerebral Cortex GW19.5
GSE71315GSM1832490Illumina HiSeq 2500Homo sapiensS44.B8Cerebral Cortex GW19.5
GSE71315GSM1832491Illumina HiSeq 2500Homo sapiensS44.B9Cerebral Cortex GW19.5
GSE71315GSM1832492Illumina HiSeq 2500Homo sapiensS44.C9Cerebral Cortex GW19.5

Gene rank in Cerebral Cortex GW19.5

Displaying 1-10 of 12884 results.
Rank orderGene SymbolEnsembl ID