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  d6 BTAG+ cells

Overall DesignRNAseq analysis of human induced pluripotent stem cells (hiPSC), incipient mesoderm-like cells (iMeLC) and primordial germ cell-like cells (BLIMP1-2A-tdTomato (BT)/TFAP2C-2A-ECFP (AG) expressing cells or EpCAM/CD49f (CSM) positive cells)
SummaryMechanisms underlying human germ cell development are unclear, partly due to difficulties in studying human embryos and lack of suitable experimental systems. Here, we show that human induced pluripotent stem cells (hiPSCs) differentiate into incipient mesoderm-like cells (iMeLCs), which robustly generate human primordial germ cell-like cells (hPGCLCs) that can be purified using the surface markers EpCAM and INTEGRINα6. The transcriptomes of hPGCLCs and primordial germ cells (PGCs) isolated from non-human primates are similar, and although specification of hPGCLCs and mouse PGCs rely on similar signaling pathways, hPGCLC specification transcriptionally activates germline fate without transiently inducing eminent somatic programs. This includes genes important for naive pluripotency and repression of key epigenetic modifiers, concomitant with epigenetic reprogramming. Accordingly, BLIMP1, which represses somatic programs in mice, activates and stabilizes a germline transcriptional circuit and represses a default neuronal differentiation program. Together, these findings provide a foundation for understanding and reconstituting human germ cell development in vitro.
Dataset viewGSE67259
PMID26189426

Samples in d6 BTAG+ cells

Displaying 1-4 of 4 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE67259GSM1643151AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+#1d6 BTAG+ cells
GSE67259GSM1643152AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+#2d6 BTAG+ cells
GSE67259GSM1643157AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+*1d6 BTAG+ cells
GSE67259GSM1643158AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+*2d6 BTAG+ cells

Gene rank in d6 BTAG+ cells

Displaying 11-20 of 20748 results.
Rank orderGene SymbolEnsembl ID
11RPS20ENSG00000008988
12RPS12ENSG00000112306
13RPS7ENSG00000171863
14RPL13AENSG00000142541
15RPL35AENSG00000182899
16RPL26ENSG00000161970
17TPT1ENSG00000133112
18RPL27AENSG00000166441
19RPL3ENSG00000100316
20RPL37ENSG00000145592