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  d6 BTAG+ cells

Overall DesignRNAseq analysis of human induced pluripotent stem cells (hiPSC), incipient mesoderm-like cells (iMeLC) and primordial germ cell-like cells (BLIMP1-2A-tdTomato (BT)/TFAP2C-2A-ECFP (AG) expressing cells or EpCAM/CD49f (CSM) positive cells)
SummaryMechanisms underlying human germ cell development are unclear, partly due to difficulties in studying human embryos and lack of suitable experimental systems. Here, we show that human induced pluripotent stem cells (hiPSCs) differentiate into incipient mesoderm-like cells (iMeLCs), which robustly generate human primordial germ cell-like cells (hPGCLCs) that can be purified using the surface markers EpCAM and INTEGRINα6. The transcriptomes of hPGCLCs and primordial germ cells (PGCs) isolated from non-human primates are similar, and although specification of hPGCLCs and mouse PGCs rely on similar signaling pathways, hPGCLC specification transcriptionally activates germline fate without transiently inducing eminent somatic programs. This includes genes important for naive pluripotency and repression of key epigenetic modifiers, concomitant with epigenetic reprogramming. Accordingly, BLIMP1, which represses somatic programs in mice, activates and stabilizes a germline transcriptional circuit and represses a default neuronal differentiation program. Together, these findings provide a foundation for understanding and reconstituting human germ cell development in vitro.
Dataset viewGSE67259
PMID26189426

Samples in d6 BTAG+ cells

Displaying 1-4 of 4 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE67259GSM1643151AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+#1d6 BTAG+ cells
GSE67259GSM1643152AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+#2d6 BTAG+ cells
GSE67259GSM1643157AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+*1d6 BTAG+ cells
GSE67259GSM1643158AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+*2d6 BTAG+ cells

Gene rank in d6 BTAG+ cells

Displaying 21-30 of 20748 results.
Rank orderGene SymbolEnsembl ID
21EEF1GENSG00000254772
22RPL13ENSG00000167526
23RPS2ENSG00000140988
24FTH1ENSG00000167996
25RPL11ENSG00000142676
26RPL37AENSG00000197756
27PPIAENSG00000196262
28RPL15ENSG00000174748
29RPL6ENSG00000089009
30RPL31ENSG00000071082