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  d6 BTAG+ cells

Overall DesignRNAseq analysis of human induced pluripotent stem cells (hiPSC), incipient mesoderm-like cells (iMeLC) and primordial germ cell-like cells (BLIMP1-2A-tdTomato (BT)/TFAP2C-2A-ECFP (AG) expressing cells or EpCAM/CD49f (CSM) positive cells)
SummaryMechanisms underlying human germ cell development are unclear, partly due to difficulties in studying human embryos and lack of suitable experimental systems. Here, we show that human induced pluripotent stem cells (hiPSCs) differentiate into incipient mesoderm-like cells (iMeLCs), which robustly generate human primordial germ cell-like cells (hPGCLCs) that can be purified using the surface markers EpCAM and INTEGRINα6. The transcriptomes of hPGCLCs and primordial germ cells (PGCs) isolated from non-human primates are similar, and although specification of hPGCLCs and mouse PGCs rely on similar signaling pathways, hPGCLC specification transcriptionally activates germline fate without transiently inducing eminent somatic programs. This includes genes important for naive pluripotency and repression of key epigenetic modifiers, concomitant with epigenetic reprogramming. Accordingly, BLIMP1, which represses somatic programs in mice, activates and stabilizes a germline transcriptional circuit and represses a default neuronal differentiation program. Together, these findings provide a foundation for understanding and reconstituting human germ cell development in vitro.
Dataset viewGSE67259
PMID26189426

Samples in d6 BTAG+ cells

Displaying 1-4 of 4 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE67259GSM1643151AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+#1d6 BTAG+ cells
GSE67259GSM1643152AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+#2d6 BTAG+ cells
GSE67259GSM1643157AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+*1d6 BTAG+ cells
GSE67259GSM1643158AB 5500xl Genetic AnalyzerHomo sapiensd6BTAG+*2d6 BTAG+ cells

Gene rank in d6 BTAG+ cells

Displaying 31-40 of 20748 results.
Rank orderGene SymbolEnsembl ID
31RPLP1ENSG00000137818
32RPS10ENSG00000124614
33RPL23ENSG00000125691
34RPS6ENSG00000137154
35RPL32ENSG00000144713
36RPL5ENSG00000122406
37RPL4ENSG00000174444
38RPS4XENSG00000198034
39RPL7ENSG00000147604
40RPS15AENSG00000134419