gene,0,0 GSM967508,0,10.144 GSM967509,0,0 GSM967510,0,0 GSM967511,0,9.703 GSM967512,0,0 GSM967513,0,0 GSM967514,0,50.433 GSM967515,0,0 GSM967516,0,0 GSM967517,0,0 GSM967518,0,0.043 GSM967519,0,0.027 GSM967520,0,0.033 GSM967521,0,0.032 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0.08 GSM967538,0,0.401 GSM967539,0,2.358 GSM967540,0,2.67 GSM967541,0,0.141 GSM967542,0,36.953 GSM967543,0,0.077 GSM967544,0,0.237 GSM967545,0,0 GSM967546,0,0 GSM967547,0,0 GSM967548,0,0.061 GSM967549,0,0.03 GSM967550,0,39.432 GSM967551,0,453.604 GSM967552,0,90.654 GSM967553,0,407.656 GSM967554,0,82.132 GSM967555,0,0.029 GSM967556,0,0 GSM967557,0,0
| Synonyms | ALI1;AMIGO-2;DEGA |
| Description | adhesion molecule with Ig-like domain 2 |
|---|---|
| Chromosome | 12q13.11 |
| Database Reference | MIM:615690 HGNC:24073 HPRD:16483 Vega:OTTHUMG00000169616 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| AMIGO2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 50.433 |
| LNCaP cell | 0 | 0.029 | 0.043 |
| NG2-sorted cell from blood | 0 | 0.24 | 2.67 |
| PC3 cell | 0.077 | 0.189 | 36.953 |
| Primary melanocyte | 0 | 0 | 0 |
| SKMEL5 cell | 0 | 0.045 | 39.432 |
| T24 cell | 82.132 | 249.155 | 453.604 |
| UACC257 cell | 0 | 0 | 0.029 |
| Comparing AMIGO2 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.00871111676954782 |
| LNCaP cell VS PC3 cell | 0.00899265178877716 |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.00675749966265086 |
| LNCaP cell VS T24 cell | 6.04152966685718e-05 |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | 0.00428202198907112 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
