gene,0,0 GSM967508,0,0 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0.08 GSM967512,0,0 GSM967513,0,0.115 GSM967514,0,0 GSM967515,0,0.039 GSM967516,0,0.03 GSM967517,0,0 GSM967518,0,0.037 GSM967519,0,0.023 GSM967520,0,0 GSM967521,0,0 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0 GSM967538,0,0 GSM967539,0,0 GSM967540,0,0.028 GSM967541,0,0.03 GSM967542,0,0.074 GSM967543,0,0 GSM967544,0,3.532 GSM967545,0,0 GSM967546,0,24.452 GSM967547,0,0 GSM967548,0,51.551 GSM967549,0,44.614 GSM967550,0,16.815 GSM967551,0,71.179 GSM967552,0,134.731 GSM967553,0,67.398 GSM967554,0,62.648 GSM967555,0,0.065 GSM967556,0,37.227 GSM967557,0,36.178
| Synonyms | CLD1;ILVASC;SEMP1 |
| Description | claudin 1 |
|---|---|
| Chromosome | 3q28-q29 |
| Database Reference | MIM:603718 HGNC:2032 HPRD:04760 Vega:OTTHUMG00000156214 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| CLDN1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.115 |
| LNCaP cell | 0 | 0.012 | 0.037 |
| NG2-sorted cell from blood | 0 | 0 | 0.028 |
| PC3 cell | 0 | 0.052 | 3.532 |
| Primary melanocyte | 0 | 12.226 | 24.452 |
| SKMEL5 cell | 0 | 30.715 | 51.551 |
| T24 cell | 62.648 | 69.289 | 134.731 |
| UACC257 cell | 0.065 | 36.178 | 37.227 |
| Comparing CLDN1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.044450113135432 |
| Embryonic stem cell VS SKMEL5 cell | 0.00112888845629194 |
| Embryonic stem cell VS T24 cell | 0.00040240427038 |
| Embryonic stem cell VS UACC257 cell | 0.00650429453527979 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | 0.0355002907849691 |
| LNCaP cell VS SKMEL5 cell | 0.000591816666003816 |
| LNCaP cell VS T24 cell | 0.000156962091865183 |
| LNCaP cell VS UACC257 cell | 0.0046810044453638 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.0191906593339346 |
| NG2-sorted cell from blood VS T24 cell | 0.00256280912181591 |
| NG2-sorted cell from blood VS UACC257 cell | 0.0488781519634322 |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
