gene,0,0 GSM967508,0,0.043 GSM967509,0,0.044 GSM967510,0,0.04 GSM967511,0,0.202 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0.045 GSM967515,0,0 GSM967516,0,348.4 GSM967517,0,184.675 GSM967518,0,100.796 GSM967519,0,44.529 GSM967520,0,8.11 GSM967521,0,109.276 GSM967535,0,481.04 GSM967536,0,273.106 GSM967537,0,265.004 GSM967538,0,392.881 GSM967539,0,151.559 GSM967540,0,275.885 GSM967541,0,0.038 GSM967542,0,0 GSM967543,0,0.083 GSM967544,0,0.042 GSM967545,0,479.62 GSM967546,0,732.964 GSM967547,0,271.117 GSM967548,0,319.805 GSM967549,0,317.596 GSM967550,0,234.411 GSM967551,0,12.357 GSM967552,0,17.1 GSM967553,0,0.034 GSM967554,0,0 GSM967555,0,256.24 GSM967556,0,552.7 GSM967557,0,482.661
| Synonyms | HGFIN;NMB |
| Description | glycoprotein nmb |
|---|---|
| Chromosome | 7p15 |
| Database Reference | MIM:604368 HGNC:4462 HPRD:05081 Vega:OTTHUMG00000022811 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| GPNMB expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.041 | 0.202 |
| LNCaP cell | 8.11 | 105.036 | 348.4 |
| NG2-sorted cell from blood | 151.559 | 274.496 | 481.04 |
| PC3 cell | 0 | 0.04 | 0.083 |
| Primary melanocyte | 479.62 | 606.292 | 732.964 |
| SKMEL5 cell | 234.411 | 294.357 | 319.805 |
| T24 cell | 0 | 6.196 | 17.1 |
| UACC257 cell | 256.24 | 482.661 | 552.7 |
| Comparing GPNMB expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 2.27589704485202e-05 |
| Embryonic stem cell VS NG2-sorted cell from blood | 7.66918509210283e-06 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.0056330303332223 |
| Embryonic stem cell VS SKMEL5 cell | 0.000171369876756714 |
| Embryonic stem cell VS T24 cell | 0.00539387073223307 |
| Embryonic stem cell VS UACC257 cell | 0.000874805535634105 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | 0.0478309039855999 |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.0343488035441554 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | 0.00580585922772334 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.00276371497403652 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
