gene,0,0 GSM967508,0,1.039 GSM967509,0,0 GSM967510,0,23.345 GSM967511,0,0 GSM967512,0,0.429 GSM967513,0,0.253 GSM967514,0,0.299 GSM967515,0,0 GSM967516,0,353.886 GSM967517,0,57.123 GSM967518,0,82.999 GSM967519,0,178.936 GSM967520,0,5.456 GSM967521,0,0.696 GSM967535,0,0 GSM967536,0,0 GSM967537,0,0.521 GSM967538,0,0.212 GSM967539,0,0 GSM967540,0,0.215 GSM967541,0,19.684 GSM967542,0,120.352 GSM967543,0,38.618 GSM967544,0,4.205 GSM967545,0,0 GSM967546,0,0.317 GSM967547,0,46.245 GSM967548,0,45.855 GSM967549,0,150.361 GSM967550,0,142.952 GSM967551,0,4.975 GSM967552,0,95.758 GSM967553,0,16.781 GSM967554,0,4.145 GSM967555,0,352.713 GSM967556,0,0.475 GSM967557,0,58.63
| Synonyms | H2B.1B;H2B/b;H2BFB;HIRIP2;dJ221C16.6 |
| Description | histone cluster 1, H2bd |
|---|---|
| Chromosome | 6p21.3 |
| Database Reference | MIM:602799 HGNC:4747 HPRD:07535 Vega:OTTHUMG00000014426 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| HIST1H2BD expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.276 | 23.345 |
| LNCaP cell | 0.696 | 70.061 | 353.886 |
| NG2-sorted cell from blood | 0 | 0.106 | 0.521 |
| PC3 cell | 4.205 | 29.151 | 120.352 |
| Primary melanocyte | 0 | 0.159 | 0.317 |
| SKMEL5 cell | 45.855 | 94.598 | 150.361 |
| T24 cell | 4.145 | 10.878 | 95.758 |
| UACC257 cell | 0.475 | 58.63 | 352.713 |
| Comparing HIST1H2BD expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.0222264291688524 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.00666207305702268 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.00402373210072089 |
| NG2-sorted cell from blood VS T24 cell | 0.0170385823465659 |
| NG2-sorted cell from blood VS UACC257 cell | 0.0290677959221343 |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
