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Gene View

General Information

HMGB1[ENSG00000189403]

SynonymsHMG-1;HMG1;HMG3;SBP-1
Descriptionhigh mobility group box 1
Chromosome13q12
Database ReferenceMIM:163905 HGNC:4983 HPRD:01228 Vega:OTTHUMG00000016670 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE63818

Gene Rank

Gene Expression

 

Displaying 1-19 of 19 results.
HMGB1 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
Primordial Germ Cells[female 10 week gestation]60.79437.884830.168
Primordial Germ Cells[female 11 week gestation]25.882161.896416.414
Primordial Germ Cells[female 17 week gestation]199.678530.3391,375.233
Primordial Germ Cells[female 4 week gestation]96.504210.038344.655
Primordial Germ Cells[female 8 week gestation]113.054274.785700.693
Primordial Germ Cells[male 10 week gestation]22.849191.749372.716
Primordial Germ Cells[male 11 week gestation]0.645190.702523.753
Primordial Germ Cells[male 19 week gestation]20.796281.722749.929
Primordial Germ Cells[male 4 week gestation]46.025275.841773.422
Primordial Germ Cells[male 7 week gestation]15.443204.802506.14
Somatic Cells[female 10 week gestation]381.849786.5042,172.368
Somatic Cells[female 11 week gestation]161.261461.2592,088.063
Somatic Cells[female 17 week gestation]0293.2752,438.516
Somatic Cells[female 4 week gestation]588.605955.5981,173.935
Somatic Cells[female 8 week gestation]10.324785.0832,079.759
Somatic Cells[male 10 week gestation]26.337537.9992,192.466
Somatic Cells[male 11 week gestation]0755.6012,501.712
Somatic Cells[male 19 week gestation]25.53379.4212,003.845
Somatic Cells[male 7 week gestation]72.692493.1442,321.06
Displaying 1-20 of 171 results.
Comparing HMGB1 expression between groupsFDR
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[female 11 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[female 17 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[female 4 week gestation]0.0487844624991845
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[female 8 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[male 10 week gestation]0.0126277521945353
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[male 11 week gestation]0.0322319747311025
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[male 19 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[male 4 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Primordial Germ Cells[male 7 week gestation]0.0129979748771286
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[female 10 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[female 11 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[female 17 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[female 4 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[female 8 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[male 10 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[male 11 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[male 19 week gestation]NS
Primordial Germ Cells[female 10 week gestation] VS Somatic Cells[male 7 week gestation]NS
Primordial Germ Cells[female 11 week gestation] VS Primordial Germ Cells[female 17 week gestation]2.99684014318077e-06
Primordial Germ Cells[female 11 week gestation] VS Primordial Germ Cells[female 4 week gestation]NS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for HMGB1

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

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