gene,0,0 GSM1160120,0,0.055 GSM1160121,0,0.254 GSM1160122,0,0 GSM1160123,0,41.068 GSM1160124,0,38.109 GSM1160125,0,29.249 GSM1160126,0,35.24 GSM1160127,0,10.403 GSM1160128,0,63.401 GSM1160129,0,28.166 GSM1160130,0,18.487 GSM1160131,0,107.96 GSM1160132,0,31.511 GSM1160133,0,9.346 GSM1160134,0,13.331 GSM1160135,0,22.278 GSM1160136,0,31.755 GSM1160138,0,15.016 GSM1160139,0,2.328 GSM1160140,0,12.366 GSM1160112,0,15.873 GSM1160113,0,1.199 GSM1160114,0,2.234 GSM1160115,0,47.666 GSM1160116,0,38.752 GSM1160117,0,1.253 GSM1160118,0,1.253 GSM1160119,0,1.089
| Synonyms | JHDM3A;JMJD2;JMJD2A;TDRD14A |
| Description | lysine demethylase 4A |
|---|---|
| Chromosome | 1p34.1 |
| Database Reference | MIM:609764 HGNC:22978 HPRD:17168 Vega:OTTHUMG00000007560 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE44183 |
| KDM4A expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| 2-cell blastomere | 0 | 0.055 | 0.254 |
| 4-cell blastomere | 29.249 | 36.674 | 41.068 |
| 8-cell blastomere | 9.346 | 25.222 | 107.96 |
| morula | 2.328 | 12.366 | 15.016 |
| oocyte | 1.199 | 2.234 | 15.873 |
| pronucleus | 1.253 | 38.752 | 47.666 |
| zygote | 1.089 | 1.171 | 1.253 |
| Comparing KDM4A expression between groups | FDR |
|---|---|
| 2-cell blastomere VS 4-cell blastomere | 0.0331347249958796 |
| 2-cell blastomere VS 8-cell blastomere | 0.00582614297099162 |
| 2-cell blastomere VS morula | NS |
| 2-cell blastomere VS oocyte | NS |
| 2-cell blastomere VS pronucleus | NS |
| 2-cell blastomere VS zygote | NS |
| 4-cell blastomere VS 8-cell blastomere | NS |
| 4-cell blastomere VS morula | 0.0475756497714327 |
| 4-cell blastomere VS oocyte | NS |
| 4-cell blastomere VS pronucleus | NS |
| 4-cell blastomere VS zygote | 0.018689572083662 |
| 8-cell blastomere VS morula | NS |
| 8-cell blastomere VS oocyte | NS |
| 8-cell blastomere VS pronucleus | NS |
| 8-cell blastomere VS zygote | NS |
| morula VS oocyte | NS |
| morula VS pronucleus | NS |
| morula VS zygote | NS |
| oocyte VS pronucleus | NS |
| oocyte VS zygote | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others 2-cell blastomere[3]
4-cell blastomere[4]
8-cell blastomere[10]
morula[3]
oocyte[3]
pronucleus[3]
zygote[2]
