gene,0,0 GSM967508,0,1019.596 GSM967509,0,320.807 GSM967510,0,574.23 GSM967511,0,332.829 GSM967512,0,445.191 GSM967513,0,1439.881 GSM967514,0,94.654 GSM967515,0,701.804 GSM967516,0,167.341 GSM967517,0,105.037 GSM967518,0,196.502 GSM967519,0,66.897 GSM967520,0,25.303 GSM967521,0,45.457 GSM967535,0,492.913 GSM967536,0,754.512 GSM967537,0,551.823 GSM967538,0,891.392 GSM967539,0,480.118 GSM967540,0,561.54 GSM967541,0,10.108 GSM967542,0,0.529 GSM967543,0,0.52 GSM967544,0,0.047 GSM967545,0,113.532 GSM967546,0,229.262 GSM967547,0,115.321 GSM967548,0,83.401 GSM967549,0,296.155 GSM967550,0,135.926 GSM967551,0,304.389 GSM967552,0,171.227 GSM967553,0,280.361 GSM967554,0,123.102 GSM967555,0,225.369 GSM967556,0,274.312 GSM967557,0,373.143
| Synonyms | PIG7;SIMPLE;TP53I7 |
| Description | lipopolysaccharide induced TNF factor |
|---|---|
| Chromosome | 16p13.13 |
| Database Reference | MIM:603795 HGNC:16841 HPRD:10354 Vega:OTTHUMG00000177415 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| LITAF expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 94.654 | 509.711 | 1,439.881 |
| LNCaP cell | 25.303 | 85.967 | 196.502 |
| NG2-sorted cell from blood | 480.118 | 556.681 | 891.392 |
| PC3 cell | 0.047 | 0.525 | 10.108 |
| Primary melanocyte | 113.532 | 171.397 | 229.262 |
| SKMEL5 cell | 83.401 | 125.623 | 296.155 |
| T24 cell | 123.102 | 225.794 | 304.389 |
| UACC257 cell | 225.369 | 274.312 | 373.143 |
| Comparing LITAF expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.00777582378158827 |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | 0.00230924317798556 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.00500381782722458 |
| LNCaP cell VS PC3 cell | 0.0369837310534556 |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.00368300067285318 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.036135434700792 |
| NG2-sorted cell from blood VS T24 cell | 0.0291064588013405 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
