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GSM1853144,0,0 GSM1853145,0,0 GSM1853147,0,323.843 GSM1853156,0,0 GSM1853163,0,0 GSM1853171,0,435.731 GSM1853178,0,238.436 GSM1853179,0,0 GSM1853181,0,9.59 GSM1853189,0,0 GSM1853194,0,0 GSM1853197,0,0 GSM1853205,0,0 GSM1853212,0,177.498 GSM1853216,0,116.863 GSM1853220,0,0 GSM1853221,0,0 GSM1853224,0,0 GSM1853231,0,26.81 GSM1853233,0,0 GSM1853244,0,0 GSM1853245,0,0 GSM1853250,0,64.482 GSM1853252,0,0 GSM1853255,0,0 GSM1853257,0,547.771 GSM1853261,0,358.17 GSM1853264,0,0 GSM1853266,0,189.996 GSM1853269,0,0 GSM1853271,0,0 GSM1853272,0,146.295 GSM1853280,0,0 GSM1853283,0,623.6 GSM1853284,0,94.563 GSM1853286,0,567.681 GSM1853287,0,716.404 GSM1853288,0,0 GSM1853290,0,0 GSM1853291,0,0 GSM1853292,0,0 GSM1853295,0,0 GSM1853298,0,0 GSM1853299,0,0 GSM1853301,0,0 GSM1853302,0,0 GSM1853304,0,0 GSM1853305,0,0 GSM1853307,0,0 GSM1853310,0,0 GSM1853312,0,0 GSM1853313,0,0 GSM1853314,0,0 GSM1853316,0,0 GSM1853321,0,0 GSM1853322,0,0 GSM1853324,0,437.557 GSM1853328,0,0 GSM1853330,0,0 GSM1853331,0,0 GSM1853334,0,0 GSM1853335,0,197.638 GSM1853337,0,0 GSM1853338,0,0 GSM1853340,0,591.42 GSM1853342,0,0 GSM1853343,0,0 GSM1853348,0,0 GSM1853350,0,0 GSM1853351,0,0 GSM1853352,0,52.771 GSM1853353,0,0 GSM1853354,0,637.003 GSM1853357,0,0 GSM1853358,0,0 GSM1853359,0,1762.449 GSM1853360,0,0 GSM1853361,0,615.31 GSM1853365,0,0 GSM1853369,0,0 GSM1853375,0,0 GSM1853376,0,0 GSM1853380,0,0 GSM1853382,0,0 GSM1853387,0,28.96 GSM1853389,0,0 GSM1853391,0,0 GSM1853397,0,733.056 GSM1853398,0,618.613 GSM1853400,0,428.377 GSM1853401,0,0 GSM1853403,0,18.101 GSM1853404,0,114.02 GSM1853405,0,0 GSM1853414,0,0 GSM1853417,0,0 GSM1853419,0,0 GSM1853420,0,118.056 GSM1853425,0,0 GSM1853426,0,0 GSM1853427,0,0 GSM1853428,0,0 GSM1853429,0,0 GSM1853431,0,0 GSM1853432,0,0 GSM1853433,0,0 GSM1853436,0,0 GSM1853437,0,0 GSM1853439,0,0 GSM1853442,0,0 GSM1853444,0,0 GSM1853446,0,0 GSM1853450,0,0 GSM1853453,0,0 GSM1853457,0,0 GSM1853458,0,0 GSM1853461,0,597.116 GSM1853464,0,16.35 GSM1853469,0,0 GSM1853473,0,0 GSM1853474,0,0 GSM1853476,0,0 GSM1853477,0,0 GSM1853480,0,0 GSM1853483,0,597.663 GSM1853491,0,0 GSM1853492,0,388.968 GSM1853493,0,0 GSM1853494,0,172.826 GSM1853497,0,0 GSM1853501,0,0 GSM1853503,0,0 GSM1853504,0,579.737 GSM1853506,0,0 GSM1853507,0,0 GSM1853510,0,0 GSM1853515,0,0 GSM1853516,0,25.801 GSM1853519,0,0 GSM1853520,0,0 GSM1853521,0,0 GSM1853523,0,0 GSM1853524,0,128.854 GSM1853525,0,0 GSM1853526,0,0 GSM1853530,0,0 GSM1853543,0,0 GSM1853546,0,0 GSM1853550,0,440.733 GSM1853554,0,0 GSM1853559,0,0 GSM1853569,0,0 GSM1853574,0,0 GSM1853585,0,0 GSM1853588,0,638.799 GSM1853590,0,0 GSM1853592,0,513.53 GSM1853604,0,0 GSM1853608,0,0 GSM1853611,0,756.918 GSM1853612,0,0 GSM1853614,0,0 GSM1853615,0,0 GSM1853620,0,685.559 GSM1853622,0,0 GSM1853623,0,0 GSM1853628,0,0 GSM1853631,0,0 GSM1853633,0,0 GSM1853634,0,0 GSM1853635,0,0 GSM1853638,0,0 GSM1853639,0,27.521 GSM1853642,0,0 GSM1853643,0,0 GSM1853645,0,0 GSM1853646,0,0 GSM1853647,0,578.634 GSM1853651,0,0 GSM1853654,0,0 GSM1853655,0,0 GSM1853657,0,20.281 GSM1853660,0,99.982 GSM1853662,0,0 GSM1853668,0,0 GSM1853673,0,374.39 GSM1853674,0,0 GSM1853685,0,0 GSM1853687,0,57.44 GSM1853688,0,0 GSM1853690,0,0 GSM1850626,0,0 GSM1850630,0,398.142 GSM1850664,0,0 GSM1850763,0,153.011 GSM1850820,0,0 GSM1850829,0,386.542 GSM1850915,0,763.86 GSM1851284,0,0 GSM1851347,0,0 GSM1851355,0,0 GSM1851360,0,205.871 GSM1851383,0,100.502 GSM1851474,0,0 GSM1851515,0,47.829 GSM1851539,0,0 GSM1851567,0,0 GSM1851588,0,0 GSM1851592,0,0 GSM1851603,0,0 GSM1851614,0,73.972 GSM1851627,0,0 GSM1851715,0,0 GSM1851743,0,0 GSM1851774,0,0 GSM1851778,0,0 GSM1851842,0,6.22 GSM1851844,0,0 GSM1851848,0,0 GSM1851858,0,431.181 GSM1851874,0,0 GSM1851903,0,0 GSM1851913,0,22.859 GSM1851989,0,0 GSM1852002,0,0 GSM1852018,0,137.516 GSM1852031,0,0 GSM1852077,0,0 GSM1852134,0,0 GSM1852144,0,9.27 GSM1852348,0,89.307 GSM1852363,0,0 GSM1852454,0,0 GSM1852477,0,0 GSM1852562,0,103.908 GSM1852663,0,0 GSM1852708,0,0 GSM1852712,0,0 GSM1852713,0,0 GSM1852735,0,0 GSM1852744,0,0 GSM1852752,0,0 GSM1852757,0,0 GSM1852779,0,220.134 GSM1852781,0,0 GSM1852792,0,0 GSM1852832,0,155.585 GSM1852935,0,94.498 GSM1852936,0,0 GSM1852941,0,0 GSM1852991,0,0 GSM1853006,0,34.469 GSM1853011,0,0 GSM1853035,0,85.692 GSM1853080,0,0 GSM1853085,0,0 GSM1853138,0,0 GSM1853148,0,0 GSM1853166,0,0 GSM1853167,0,0 GSM1853198,0,0 GSM1853211,0,29.28 GSM1853234,0,0 GSM1853270,0,0 GSM1853289,0,0 GSM1853378,0,130.237 GSM1853406,0,152.695 GSM1853408,0,148.202 GSM1853500,0,0 GSM1853522,0,259.684 GSM1853649,0,256.673 GSM1853678,0,297.54 GSM1853681,0,0 GSM1853691,0,122.15 GSM1853692,0,0 GSM1853703,0,74.532 GSM1853709,0,0 GSM1853719,0,0 GSM1853724,0,44.358 GSM1853727,0,48.252 GSM1853732,0,127.695 GSM1853749,0,0 GSM1853759,0,38.009 GSM1853767,0,72.3 GSM1853797,0,0 GSM1853803,0,70.261 GSM1853807,0,64.472
| Synonyms | CASM;YJL124C |
| Description | LSM1 homolog, mRNA degradation associated |
|---|---|
| Chromosome | 8p11.2 |
| Database Reference | MIM:607281 HGNC:20472 HPRD:06281 Vega:OTTHUMG00000164051 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE72056 |
| LSM1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| B-cell | 0 | 0 | 583.963 |
| CAF | 0 | 0 | 326.072 |
| Endothelial cell | 0 | 0 | 317.813 |
| Macrophage | 0 | 0 | 380.27 |
| melanoma | 0 | 0 | 854.444 |
| melanoma tumor | 0 | 0 | 935.038 |
| T-cell | 0 | 0 | 1,762.449 |
| unresolved | 0 | 0 | 763.86 |
| Comparing LSM1 expression between groups | FDR |
|---|---|
| B-cell VS CAF | NS |
| B-cell VS Endothelial cell | NS |
| B-cell VS Macrophage | NS |
| B-cell VS T-cell | 0.00136781448388012 |
| B-cell VS melanoma tumor | 0.00879763694751175 |
| B-cell VS melanoma | 2.60467701766311e-05 |
| B-cell VS unresolved | NS |
| CAF VS Endothelial cell | NS |
| CAF VS Macrophage | NS |
| CAF VS T-cell | NS |
| CAF VS melanoma tumor | NS |
| CAF VS melanoma | NS |
| CAF VS unresolved | NS |
| Endothelial cell VS Macrophage | NS |
| Endothelial cell VS T-cell | NS |
| Endothelial cell VS melanoma tumor | NS |
| Endothelial cell VS melanoma | NS |
| Endothelial cell VS unresolved | NS |
| Macrophage VS T-cell | NS |
| Macrophage VS melanoma tumor | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others B-cell[326]
CAF[39]
Endothelial cell[40]
Macrophage[42]
melanoma[1071]
melanoma tumor[246]
T-cell[1302]
unresolved[96]
