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General Information

MALAT1[ENSG00000251562]

SynonymsHCN;LINC00047;NCRNA00047;NEAT2;PRO2853;mascRNA
Descriptionmetastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
Chromosome11q13.1
Database ReferenceMIM:607924 HGNC:29665 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE72056

Gene Rank

Gene Expression

 

Displaying 1-8 of 8 results.
MALAT1 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
B-cell125.022,653.6326,491.821
CAF74.491761.5575,407.187
Endothelial cell162.9521,812.6193,854.934
Macrophage01,021.7095,391.813
melanoma01,084.6326,586.119
melanoma tumor02,623.3410,919.411
T-cell37.8492,716.96118,193.498
unresolved01,282.459,273.339
Displaying 21-28 of 28 results.
Comparing MALAT1 expression between groupsFDR
Macrophage VS melanomaNS
Macrophage VS unresolvedNS
T-cell VS unresolved1.30788569197742e-15
melanoma tumor VS T-cellNS
melanoma tumor VS unresolved3.20030494376219e-06
melanoma VS T-cell6.07470403399726e-110
melanoma VS melanoma tumor4.11589972328908e-26
melanoma VS unresolvedNS
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for MALAT1

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 B-cell[326]
 CAF[39]
 Endothelial cell[40]
 Macrophage[42]
 melanoma[1071]
 melanoma tumor[246]
 T-cell[1302]
 unresolved[96]