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Gene View

General Information

NCAN[ENSG00000130287]

SynonymsCSPG3
Descriptionneurocan
Chromosome19p12
Database ReferenceMIM:600826 HGNC:2465 HPRD:02897 Vega:OTTHUMG00000182218 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
NCAN expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]00400.802
fetal human cortex 1[12 weeks post-conception]071.521731.402
fetal human cortex 2[13 weeks post-conception]0275.854693.042
iPSC 409B2[33 days]00238.068
iPSC 409B2[35 days]00250.091
iPSC 409B2[37 days]00238.901
iPSC 409B2[41 days]00574.546
iPSC 409B2[58 days]00729.221
iPSC 409B2[65 days]00614.262
Displaying 1-20 of 36 results.
Comparing NCAN expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]1.15027048823979e-06
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]1.02005464294088e-05
ESC H9[53 days] VS iPSC 409B2[33 days]NS
ESC H9[53 days] VS iPSC 409B2[35 days]NS
ESC H9[53 days] VS iPSC 409B2[37 days]NS
ESC H9[53 days] VS iPSC 409B2[41 days]NS
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]5.30901037187205e-10
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]6.57264668648399e-13
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]5.63696687492891e-15
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]1.53695270489941e-07
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]0.000541898422508951
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]5.03611309726682e-06
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]6.18896998010034e-10
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]2.93845697818988e-10
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]2.51838379516482e-05
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]0.00161402204286173
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for NCAN

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]