gene,0,0 GSM1160120,0,4.512 GSM1160121,0,1.543 GSM1160122,0,5.214 GSM1160123,0,0.454 GSM1160124,0,0.581 GSM1160125,0,0.508 GSM1160126,0,0.599 GSM1160127,0,1.598 GSM1160128,0,1.18 GSM1160129,0,0.436 GSM1160130,0,4.504 GSM1160131,0,1.18 GSM1160132,0,3.977 GSM1160133,0,0.183 GSM1160134,0,0.672 GSM1160135,0,11.402 GSM1160136,0,13.127 GSM1160138,0,13.727 GSM1160139,0,19.99 GSM1160140,0,18.83 GSM1160112,0,9.626 GSM1160113,0,11.008 GSM1160114,0,11.096 GSM1160115,0,14.569 GSM1160116,0,11.129 GSM1160117,0,7.353 GSM1160118,0,6.3 GSM1160119,0,9.931
| Synonyms | ENH;ENH1;L9;LIM |
| Description | PDZ and LIM domain 5 |
|---|---|
| Chromosome | 4q22 |
| Database Reference | MIM:605904 HGNC:17468 HPRD:05799 Vega:OTTHUMG00000130973 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE44183 |
| PDLIM5 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| 2-cell blastomere | 1.543 | 4.512 | 5.214 |
| 4-cell blastomere | 0.454 | 0.545 | 0.599 |
| 8-cell blastomere | 0.183 | 1.389 | 13.127 |
| morula | 13.727 | 18.83 | 19.99 |
| oocyte | 9.626 | 11.008 | 11.096 |
| pronucleus | 7.353 | 11.129 | 14.569 |
| zygote | 6.3 | 8.116 | 9.931 |
| Comparing PDLIM5 expression between groups | FDR |
|---|---|
| 2-cell blastomere VS 4-cell blastomere | NS |
| 2-cell blastomere VS 8-cell blastomere | NS |
| 2-cell blastomere VS morula | NS |
| 2-cell blastomere VS oocyte | NS |
| 2-cell blastomere VS pronucleus | NS |
| 2-cell blastomere VS zygote | NS |
| 4-cell blastomere VS 8-cell blastomere | NS |
| 4-cell blastomere VS morula | 0.011561896614875 |
| 4-cell blastomere VS oocyte | 0.00349515257509231 |
| 4-cell blastomere VS pronucleus | 0.0196195260199664 |
| 4-cell blastomere VS zygote | 0.0149826535454448 |
| 8-cell blastomere VS morula | NS |
| 8-cell blastomere VS oocyte | NS |
| 8-cell blastomere VS pronucleus | NS |
| 8-cell blastomere VS zygote | NS |
| morula VS oocyte | NS |
| morula VS pronucleus | NS |
| morula VS zygote | NS |
| oocyte VS pronucleus | NS |
| oocyte VS zygote | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others 2-cell blastomere[3]
4-cell blastomere[4]
8-cell blastomere[10]
morula[3]
oocyte[3]
pronucleus[3]
zygote[2]
