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GSM1853052,0,0 GSM1853058,0,2.25 GSM1853064,0,0 GSM1853067,0,6.23 GSM1853069,0,0 GSM1853073,0,2.32 GSM1853082,0,4.79 GSM1853083,0,0 GSM1853084,0,0 GSM1853090,0,6.68 GSM1853094,0,0 GSM1853096,0,0 GSM1853097,0,6.38 GSM1853098,0,0.99 GSM1853099,0,0 GSM1853105,0,0 GSM1853106,0,0 GSM1853120,0,0 GSM1853123,0,3.44 GSM1853124,0,3.48 GSM1853127,0,3.14 GSM1853128,0,0 GSM1853132,0,0 GSM1853142,0,0 GSM1853144,0,0 GSM1853145,0,9.08 GSM1853147,0,0 GSM1853156,0,0 GSM1853163,0,21.54 GSM1853171,0,0 GSM1853178,0,0 GSM1853179,0,4.65 GSM1853181,0,2.99 GSM1853189,0,0 GSM1853194,0,0 GSM1853197,0,0 GSM1853205,0,0 GSM1853212,0,0 GSM1853216,0,0 GSM1853220,0,0 GSM1853221,0,0 GSM1853224,0,0 GSM1853231,0,0 GSM1853233,0,4.15 GSM1853244,0,0 GSM1853245,0,0 GSM1853250,0,0 GSM1853252,0,0 GSM1853255,0,0 GSM1853257,0,4.64 GSM1853261,0,0 GSM1853264,0,0 GSM1853266,0,7.1 GSM1853269,0,0 GSM1853271,0,1.41 GSM1853272,0,0 GSM1853280,0,0 GSM1853283,0,0 GSM1853284,0,22.27 GSM1853286,0,0 GSM1853287,0,0 GSM1853288,0,0 GSM1853290,0,0 GSM1853291,0,0 GSM1853292,0,0 GSM1853295,0,4.83 GSM1853298,0,0 GSM1853299,0,0 GSM1853301,0,0 GSM1853302,0,6.21 GSM1853304,0,0 GSM1853305,0,5.32 GSM1853307,0,0 GSM1853310,0,0 GSM1853312,0,0 GSM1853313,0,3.57 GSM1853314,0,0 GSM1853316,0,2.7 GSM1853321,0,2.33 GSM1853322,0,0 GSM1853324,0,0 GSM1853328,0,0.74 GSM1853330,0,4.8 GSM1853331,0,2.44 GSM1853334,0,0 GSM1853335,0,2.52 GSM1853337,0,21.46 GSM1853338,0,3.72 GSM1853340,0,0 GSM1853342,0,0 GSM1853343,0,0 GSM1853348,0,0 GSM1853350,0,0 GSM1853351,0,0 GSM1853352,0,0 GSM1853353,0,0 GSM1853354,0,0 GSM1853357,0,0 GSM1853358,0,0 GSM1853359,0,0 GSM1853360,0,0 GSM1853361,0,0 GSM1853365,0,0 GSM1853369,0,9.16 GSM1853375,0,0 GSM1853376,0,0 GSM1853380,0,5.39 GSM1853382,0,0 GSM1853387,0,0 GSM1853389,0,0 GSM1853391,0,0 GSM1853397,0,0 GSM1853398,0,16.98 GSM1853400,0,12.17 GSM1853401,0,0 GSM1853403,0,0 GSM1853404,0,0 GSM1853405,0,0 GSM1853414,0,4.37 GSM1853417,0,0 GSM1853419,0,0 GSM1853420,0,0 GSM1853425,0,0 GSM1853426,0,0 GSM1853427,0,7.52 GSM1853428,0,0 GSM1853429,0,0 GSM1853431,0,0 GSM1853432,0,0 GSM1853433,0,0 GSM1853436,0,3.31 GSM1853437,0,0 GSM1853439,0,2.42 GSM1853442,0,0 GSM1853444,0,0 GSM1853446,0,3.38 GSM1853450,0,0 GSM1853453,0,6.79 GSM1853457,0,0 GSM1853458,0,0 GSM1853461,0,0 GSM1853464,0,0 GSM1853469,0,2.98 GSM1853473,0,0 GSM1853474,0,0 GSM1853476,0,0 GSM1853477,0,0 GSM1853480,0,0 GSM1853483,0,0 GSM1853491,0,4.69 GSM1853492,0,0 GSM1853493,0,5.13 GSM1853494,0,0 GSM1853497,0,0 GSM1853501,0,0 GSM1853503,0,0 GSM1853504,0,0 GSM1853506,0,0 GSM1853507,0,0 GSM1853510,0,6.07 GSM1853515,0,0 GSM1853516,0,0 GSM1853519,0,0 GSM1853520,0,5.15 GSM1853521,0,7.97 GSM1853523,0,0 GSM1853524,0,45.408 GSM1853525,0,0 GSM1853526,0,0 GSM1853530,0,9.32 GSM1853543,0,0 GSM1853546,0,0 GSM1853550,0,4.47 GSM1853554,0,0 GSM1853559,0,0 GSM1853569,0,0 GSM1853574,0,0 GSM1853585,0,0 GSM1853588,0,0 GSM1853590,0,0 GSM1853592,0,0 GSM1853604,0,0 GSM1853608,0,0 GSM1853611,0,0 GSM1853612,0,0 GSM1853614,0,0 GSM1853615,0,0 GSM1853620,0,0 GSM1853622,0,0 GSM1853623,0,0 GSM1853628,0,12.42 GSM1853631,0,0 GSM1853633,0,0 GSM1853634,0,0 GSM1853635,0,0 GSM1853638,0,0 GSM1853639,0,0 GSM1853642,0,0 GSM1853643,0,0 GSM1853645,0,0 GSM1853646,0,4.25 GSM1853647,0,0 GSM1853651,0,0 GSM1853654,0,14.069 GSM1853655,0,0 GSM1853657,0,0 GSM1853660,0,0 GSM1853662,0,0 GSM1853668,0,0 GSM1853673,0,0 GSM1853674,0,0 GSM1853685,0,9.69 GSM1853687,0,0 GSM1853688,0,10.76 GSM1853690,0,3.93 GSM1850626,0,14.329 GSM1850630,0,45.389 GSM1850664,0,0 GSM1850763,0,0 GSM1850820,0,1.41 GSM1850829,0,11.491 GSM1850915,0,0.3 GSM1851284,0,0 GSM1851347,0,0 GSM1851355,0,0 GSM1851360,0,0 GSM1851383,0,0 GSM1851474,0,0 GSM1851515,0,38.72 GSM1851539,0,0 GSM1851567,0,0 GSM1851588,0,0 GSM1851592,0,0 GSM1851603,0,0 GSM1851614,0,58.9 GSM1851627,0,1.81 GSM1851715,0,0 GSM1851743,0,2.68 GSM1851774,0,0 GSM1851778,0,0 GSM1851842,0,134.5 GSM1851844,0,0 GSM1851848,0,0 GSM1851858,0,0 GSM1851874,0,0 GSM1851903,0,5.77 GSM1851913,0,0 GSM1851989,0,6.42 GSM1852002,0,0 GSM1852018,0,56.139 GSM1852031,0,78.293 GSM1852077,0,3.97 GSM1852134,0,3.19 GSM1852144,0,2.27 GSM1852348,0,422.911 GSM1852363,0,0 GSM1852454,0,17.34 GSM1852477,0,0 GSM1852562,0,2.07 GSM1852663,0,18.53 GSM1852708,0,70.651 GSM1852712,0,29.049 GSM1852713,0,3.17 GSM1852735,0,121.209 GSM1852744,0,3.93 GSM1852752,0,0 GSM1852757,0,162.964 GSM1852779,0,0 GSM1852781,0,0 GSM1852792,0,0 GSM1852832,0,0 GSM1852935,0,26.711 GSM1852936,0,0 GSM1852941,0,354.968 GSM1852991,0,309.623 GSM1853006,0,88.868 GSM1853011,0,134.711 GSM1853035,0,342.219 GSM1853080,0,88.492 GSM1853085,0,0 GSM1853138,0,149.005 GSM1853148,0,0 GSM1853166,0,0 GSM1853167,0,0 GSM1853198,0,0 GSM1853211,0,30.92 GSM1853234,0,0 GSM1853270,0,4.47 GSM1853289,0,0 GSM1853378,0,0 GSM1853406,0,547.268 GSM1853408,0,1178.666 GSM1853500,0,0 GSM1853522,0,423.001 GSM1853649,0,0 GSM1853678,0,1590.08 GSM1853681,0,0 GSM1853691,0,803.573 GSM1853692,0,961.606 GSM1853703,0,0.69 GSM1853709,0,0 GSM1853719,0,0 GSM1853724,0,3.34 GSM1853727,0,0.88 GSM1853732,0,0 GSM1853749,0,3.37 GSM1853759,0,0.7 GSM1853767,0,0 GSM1853797,0,0 GSM1853803,0,1.01 GSM1853807,0,1.09
| Synonyms | CAVIN;CAVIN1;CGL4;FKSG13;cavin-1 |
| Description | polymerase I and transcript release factor |
|---|---|
| Chromosome | 17q21.2 |
| Database Reference | MIM:603198 HGNC:9688 HPRD:04433 Vega:OTTHUMG00000180137 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE72056 |
| PTRF expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| B-cell | 0 | 0 | 190.024 |
| CAF | 0 | 478.775 | 1,035.102 |
| Endothelial cell | 0 | 286.991 | 1,495.71 |
| Macrophage | 0 | 0 | 19.3 |
| melanoma | 0 | 6.54 | 657.086 |
| melanoma tumor | 0 | 0 | 4,232.88 |
| T-cell | 0 | 0 | 87.331 |
| unresolved | 0 | 0.695 | 1,590.08 |
| Comparing PTRF expression between groups | FDR |
|---|---|
| Macrophage VS melanoma | 1.64284857462387e-24 |
| Macrophage VS unresolved | 2.3292360924782e-09 |
| T-cell VS unresolved | 9.70924985586667e-34 |
| melanoma tumor VS T-cell | 1.22602638853912e-44 |
| melanoma tumor VS unresolved | NS |
| melanoma VS T-cell | 4.85031313932842e-190 |
| melanoma VS melanoma tumor | 0.0238349445685833 |
| melanoma VS unresolved | 0.00415317043827051 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others B-cell[326]
CAF[39]
Endothelial cell[40]
Macrophage[42]
melanoma[1071]
melanoma tumor[246]
T-cell[1302]
unresolved[96]
