gene,0,0 GSM967508,0,0.122 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0.063 GSM967515,0,0.07 GSM967516,0,0 GSM967517,0,0.401 GSM967518,0,0 GSM967519,0,0 GSM967520,0,7.937 GSM967521,0,0 GSM967535,0,138.253 GSM967536,0,38.872 GSM967537,0,37.45 GSM967538,0,118.547 GSM967539,0,11.628 GSM967540,0,128.58 GSM967541,0,22.797 GSM967542,0,7.115 GSM967543,0,2.235 GSM967544,0,3.771 GSM967545,0,0 GSM967546,0,0 GSM967547,0,40.548 GSM967548,0,34.047 GSM967549,0,54.119 GSM967550,0,14.046 GSM967551,0,39.546 GSM967552,0,2.619 GSM967553,0,0 GSM967554,0,0 GSM967555,0,0.058 GSM967556,0,0 GSM967557,0,1.882
| RAGE expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.122 |
| LNCaP cell | 0 | 0 | 7.937 |
| NG2-sorted cell from blood | 11.628 | 78.71 | 138.253 |
| PC3 cell | 2.235 | 5.443 | 22.797 |
| Primary melanocyte | 0 | 0 | 0 |
| SKMEL5 cell | 14.046 | 37.297 | 54.119 |
| T24 cell | 0 | 1.309 | 39.546 |
| UACC257 cell | 0 | 0.058 | 1.882 |
| Comparing RAGE expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.0294140685454509 |
| Embryonic stem cell VS NG2-sorted cell from blood | 3.95853472018198e-05 |
| Embryonic stem cell VS PC3 cell | 0.00343724977567618 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | 0.000661786204431485 |
| Embryonic stem cell VS T24 cell | 0.00670239051124868 |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.0226074098234321 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
