gene,0,0 GSM967508,0,233.574 GSM967509,0,1.501 GSM967510,0,149.546 GSM967511,0,4.776 GSM967512,0,75.853 GSM967513,0,0.49 GSM967514,0,129.946 GSM967515,0,24.948 GSM967516,0,747.611 GSM967517,0,2767.794 GSM967518,0,277.823 GSM967519,0,322.593 GSM967520,0,397.933 GSM967521,0,252.351 GSM967535,0,848.936 GSM967536,0,427.611 GSM967537,0,116.979 GSM967538,0,1342.999 GSM967539,0,597.091 GSM967540,0,1146.207 GSM967541,0,107.685 GSM967542,0,175.865 GSM967543,0,209.51 GSM967544,0,151.222 GSM967545,0,669.696 GSM967546,0,2761.876 GSM967547,0,1182.599 GSM967548,0,1374.777 GSM967549,0,2095.618 GSM967550,0,1800.858 GSM967551,0,425.349 GSM967552,0,723.806 GSM967553,0,472.937 GSM967554,0,534.085 GSM967555,0,1408.508 GSM967556,0,1505.902 GSM967557,0,4754.422
| Synonyms | MDA-9;MDA9;ST1;SYCL;TACIP18 |
| Description | syndecan binding protein |
|---|---|
| Chromosome | 8q12 |
| Database Reference | MIM:602217 HGNC:10662 HPRD:03741 Vega:OTTHUMG00000164303 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SDCBP expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0.49 | 50.401 | 233.574 |
| LNCaP cell | 252.351 | 360.263 | 2,767.794 |
| NG2-sorted cell from blood | 116.979 | 723.014 | 1,342.999 |
| PC3 cell | 107.685 | 163.544 | 209.51 |
| Primary melanocyte | 669.696 | 1,715.786 | 2,761.876 |
| SKMEL5 cell | 1,182.599 | 1,587.817 | 2,095.618 |
| T24 cell | 425.349 | 503.511 | 723.806 |
| UACC257 cell | 1,408.508 | 1,505.902 | 4,754.422 |
| Comparing SDCBP expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.0300913485188056 |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.0159410854884365 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | 0.0113435192294452 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.0321832761728582 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.03921654002305 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.00538528524912923 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
