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scRNASeqDB
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Gene View

General Information

SGCB[ENSG00000163069]

SynonymsA3b;LGMD2E;SGC
Descriptionsarcoglycan beta
Chromosome4q12
Database ReferenceMIM:600900 HGNC:10806 HPRD:02942 Vega:OTTHUMG00000128697 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
SGCB expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]00504.775
fetal human cortex 1[12 weeks post-conception]00830.799
fetal human cortex 2[13 weeks post-conception]0231.658797.317
iPSC 409B2[33 days]092.011284.674
iPSC 409B2[35 days]0122.773453.341
iPSC 409B2[37 days]0119.873422.405
iPSC 409B2[41 days]0105.025672.825
iPSC 409B2[58 days]00738.528
iPSC 409B2[65 days]00597.965
Displaying 1-20 of 36 results.
Comparing SGCB expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]NS
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]0.01105632365191
ESC H9[53 days] VS iPSC 409B2[33 days]NS
ESC H9[53 days] VS iPSC 409B2[35 days]NS
ESC H9[53 days] VS iPSC 409B2[37 days]NS
ESC H9[53 days] VS iPSC 409B2[41 days]NS
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]0.0213462213219141
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]0.0392498231355631
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]0.00010118803332895
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]0.000640211242673685
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]0.000154746255053258
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]0.0104282979517311
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]0.00784499635201989
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for SGCB

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]