gene,0,0 GSM967508,0,0 GSM967509,0,0.012 GSM967510,0,0 GSM967511,0,0.014 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0 GSM967515,0,0 GSM967516,0,0 GSM967517,0,0.01 GSM967518,0,0.026 GSM967519,0,0 GSM967520,0,0.063 GSM967521,0,0.012 GSM967535,0,3.996 GSM967536,0,0.041 GSM967537,0,15.764 GSM967538,0,7.128 GSM967539,0,12.293 GSM967540,0,0 GSM967541,0,0.021 GSM967542,0,0.039 GSM967543,0,1.632 GSM967544,0,0.023 GSM967545,0,0.046 GSM967546,0,72.615 GSM967547,0,0 GSM967548,0,13.6 GSM967549,0,12.287 GSM967550,0,0.647 GSM967551,0,0 GSM967552,0,0.019 GSM967553,0,0.01 GSM967554,0,0.01 GSM967555,0,0.254 GSM967556,0,20.579 GSM967557,0,43.568
| Synonyms | 35DAG;CMD1L;DAGD;SG-delta;SGCDP;SGD |
| Description | sarcoglycan delta |
|---|---|
| Chromosome | 5q33.3 |
| Database Reference | MIM:601411 HGNC:10807 HPRD:03246 Vega:OTTHUMG00000163445 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| SGCD expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.014 |
| LNCaP cell | 0 | 0.011 | 0.063 |
| NG2-sorted cell from blood | 0 | 5.562 | 15.764 |
| PC3 cell | 0.021 | 0.031 | 1.632 |
| Primary melanocyte | 0.046 | 36.33 | 72.615 |
| SKMEL5 cell | 0 | 6.467 | 13.6 |
| T24 cell | 0 | 0.01 | 0.019 |
| UACC257 cell | 0.254 | 20.579 | 43.568 |
| Comparing SGCD expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.000237723540060583 |
| Embryonic stem cell VS PC3 cell | 0.0295722024390017 |
| Embryonic stem cell VS Primary melanocyte | 0.0183233798111326 |
| Embryonic stem cell VS SKMEL5 cell | 0.00175095828341735 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.0045340683096751 |
| LNCaP cell VS NG2-sorted cell from blood | 0.000538544793976651 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | 0.0335327303214414 |
| LNCaP cell VS SKMEL5 cell | 0.00347171687177129 |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | 0.0086093785545711 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
