gene,0,0 GSM967508,0,3855.218 GSM967509,0,2322.413 GSM967510,0,2211.727 GSM967511,0,2328.925 GSM967512,0,2023.415 GSM967513,0,2634.511 GSM967514,0,2857.996 GSM967515,0,2410.47 GSM967516,0,1754.116 GSM967517,0,1166.176 GSM967518,0,1700.939 GSM967519,0,1325.73 GSM967520,0,1287.543 GSM967521,0,1392.492 GSM967535,0,2993.926 GSM967536,0,4007.61 GSM967537,0,3551.146 GSM967538,0,2571.714 GSM967539,0,3212.44 GSM967540,0,2981.53 GSM967541,0,1832.259 GSM967542,0,1856.818 GSM967543,0,1288.328 GSM967544,0,1421.322 GSM967545,0,2122.357 GSM967546,0,2834.796 GSM967547,0,3387.343 GSM967548,0,2590.851 GSM967549,0,2577.423 GSM967550,0,2852.004 GSM967551,0,677.761 GSM967552,0,1175.763 GSM967553,0,884.291 GSM967554,0,1131.228 GSM967555,0,701.442 GSM967556,0,1886.945 GSM967557,0,1231.07
Synonyms | DSS1;ECD;SEM1;SHFD1;SHSF1;Shfdg1 |
Description | split hand/foot malformation (ectrodactyly) type 1 |
---|---|
Chromosome | 7q21.3 |
Database Reference | MIM:601285 HGNC:10845 HPRD:03182 Vega:OTTHUMG00000150680 |
See related | THE HUMAN PROTEIN ATLAS |
Dataset | GSE38495 |
SHFM1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
---|---|---|---|
Embryonic stem cell | 2,023.415 | 2,369.697 | 3,855.218 |
LNCaP cell | 1,166.176 | 1,359.111 | 1,754.116 |
NG2-sorted cell from blood | 2,571.714 | 3,103.183 | 4,007.61 |
PC3 cell | 1,288.328 | 1,626.79 | 1,856.818 |
Primary melanocyte | 2,122.357 | 2,478.577 | 2,834.796 |
SKMEL5 cell | 2,577.423 | 2,721.428 | 3,387.343 |
T24 cell | 677.761 | 1,007.759 | 1,175.763 |
UACC257 cell | 701.442 | 1,231.07 | 1,886.945 |
Comparing SHFM1 expression between groups | FDR |
---|---|
Embryonic stem cell VS LNCaP cell | 0.0039978352207901 |
Embryonic stem cell VS NG2-sorted cell from blood | NS |
Embryonic stem cell VS PC3 cell | NS |
Embryonic stem cell VS Primary melanocyte | NS |
Embryonic stem cell VS SKMEL5 cell | NS |
Embryonic stem cell VS T24 cell | 0.00293137206734957 |
Embryonic stem cell VS UACC257 cell | NS |
LNCaP cell VS NG2-sorted cell from blood | 0.000626058258880056 |
LNCaP cell VS PC3 cell | NS |
LNCaP cell VS Primary melanocyte | NS |
LNCaP cell VS SKMEL5 cell | 0.00546501101636375 |
LNCaP cell VS T24 cell | NS |
LNCaP cell VS UACC257 cell | NS |
NG2-sorted cell from blood VS PC3 cell | 0.0104730218540586 |
NG2-sorted cell from blood VS Primary melanocyte | NS |
NG2-sorted cell from blood VS SKMEL5 cell | NS |
NG2-sorted cell from blood VS T24 cell | 0.00282416929818424 |
NG2-sorted cell from blood VS UACC257 cell | NS |
PC3 cell VS Primary melanocyte | NS |
PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]